Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VLFVHSAPTALCPHVEWAIGSVVDKRTDLEWTAQPAAPGMFRAELSWTGKPGTGAQLASALRGWAHLRYEVTEEPSQGVDGGRWSHTPELGIFHATTDVHGNIMVSEDRIRYAYESGAGDPSAVYHELSLALGEAWDEELEPFRHAGEGAPVRWLHQ |
1 | 4xrtA2 | 0.14 | 0.12 | 4.12 | 0.62 | SPARKS-K | | PLFVAGAVDDAYTYLYDKWPERIPHVARLVMEE--RVPNIQFFDMDTTTPDG------------SAHTTRSVRVCLPGD---KIVYKPKLGHWKFTPTREGRHTATIK--PSALPILGTTVLDARKYLRRVLSANSMGNLRLAKAFAEERAGV---- |
2 | 4xrwA2 | 0.13 | 0.12 | 4.18 | 0.55 | FFAS-3D | | -VRIDAPAKDVYDFVDQLWAERLPHVSSVDLREP--SPGLQVLRMDTRAKDGSVHTTESVRVCFPHHRIVYKQTTLPALMTGRWDFAEEPGTTASSE---HTVVLNTANIAKVL-GAGAGVAEAREFVRTALSTNSRATLGFAKDHAEARP------ |
3 | 2ozgA3 | 0.14 | 0.10 | 3.29 | 0.24 | HHpred | | ------------YPATQRLYRK--AGY----EQAGSSQRWLRIV-------N----VCKALEGYAELHLEV-QDDLLATNQGKFILSVANGKSEVTKGGKGELQLDIKGLASLYTSLF-TPRQLQLTGK-LQATTALLKATQI-------------- |
4 | 4xrwA2 | 0.14 | 0.13 | 4.33 | 0.87 | MUSTER | | TVRIDAPAKDVYDFVD--AALWAEHVSSVDLRE--PSPGLQVLRMDTRAKDGSVHTTESVCFPHHRIVYKQTTLPALMTLHGRWDFAEEPGSSEHTVVLNTA-------NIAKVLGAGAGVAEAREFVRTALSTNSRATLGFAKDHAEARP------ |
5 | 3cb2A | 0.13 | 0.11 | 3.77 | 0.64 | CNFpred | | ----------IHEDIFDIIDREADGSD-----------SLEGFVLCHSIAGGTGSGLGSYLLE-KKLVQTYSVFPNQDEMSVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGY--MNNDLIG |
6 | 2ob9A | 0.14 | 0.07 | 2.38 | 0.41 | HHsearch-2 | | -----------------------------------------------------SQTLKQL-AAKAGFRHKTVVVPE--WEGKVVLREPSGRNLDVLCDTDKQPVFSVDEEEQVREIYGPVHSRLLKQALDLIN------------------------ |
7 | 4xrtA2 | 0.11 | 0.11 | 3.87 | 0.82 | Neff-PPAS | | PLFVAGAVDDAYTYLYDKWPERIPHVARLVMEERVPNIQFFDMDTTTPDGSAHTTRSVRVCLPGDKIVYKQIQLP-KLLTGHTGHWKFTPTREGFVLGARHTATIKPSALPILGEGT--TVLDARKYLRRVLSANSMGNLRLAKAAEERAGV----- |
8 | 2ob9A | 0.17 | 0.08 | 2.73 | 0.57 | HHsearch | | -----------------------------------------------------SQTLKQL-AAKAGFRHKTVVVPEW--EGKVVLREPSGRNLDVLCDTDKQPVFSVDEEEQVREIYG---PVHSRLLKQALDLIN--------------------- |
9 | 4xrwA2 | 0.14 | 0.12 | 4.14 | 0.64 | SP3 | | DVY-----DFVDQ--AALWAERLPHVSSVDLRE--PSPGLQVLRMDTRAKDGSVHTTESVCFPHHRIVYKQTTLPALMTLHGRWDFAEEPGTASSEH----TVVLNTANIAKVLG-AGAGVAEAREFVRTALSTNSRATLGFAKDHAEARP------ |
10 | 4xrwA2 | 0.13 | 0.12 | 4.17 | 0.60 | PROSPECTOR2 | | NVRIDAPAKDVYDFVDALWAERLPHVSSVDLREPS--PGLQVLRMDTRAKDGSVHTTESVRVCFPHHRIVYKQTTLPALMTLRWDFAEEPGSSEHT------VVLNTANIAKVL-GAGAGVAEAREFVRTALSTNSRATLGFAKDHAEARP------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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