Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | DGRPLIAVVRLDGQLPSLNQDDILQQVQQLLADWQGQGLTLAGLEIDHDAGSARLPAYAGLLRRLREALPPQLALSITALPAWLDSRELPGLLAQVDSSVLQVHAVSDPRRGLFDPHQAEQWARRWAGVSDKPFYLALPAYGVALLPGTAQAPVVESEAPIARRGQRRELMADPEQLSQLAKTLRNDPPAHLAGLIWFRLPLKGDVRAWSLETLRAVARGDV |
1 | 4s3jA | 0.12 | 0.12 | 4.13 | 1.12 | SPARKS-K | | GQTIPMLVITNIENGNFSAQNKFITNILQTAEKYG-----MRDIHFDFEVAPEDREAYNRFLRNVKIRLPSGYTLSTTLVPKTSSNQDYKAQGQIVDFVVIMTYDWGWQGGPPSPIGPVKEVLQYAKSQMPPKIMMGQNLYGFDWKLPNPPAKAVSVPIRYDFTAQGVQHEVWFEDARSIQSKFNLMKEQGIGGISYWKIGLPFP---QNWRLLVENFTITK |
2 | 4s3jA2 | 0.13 | 0.12 | 4.22 | 1.66 | FFAS-3D | | ----MLVITNIENGRDATIQNKFITNILQTAEKY-----GMRDIHFDFESVPEDREAYNRFLRNVKIRLPSGYTLSTTLVPKFFEAHDYKAQGQIVDFVVIMTYDWGWPPMAISPIGPVKEVLQYAKSMPPQKIMMGQNLYGFDWKLPFKQAQAPHFNYFDENGVQHEVWFEDARSIQSKFNLMKE---QGIGGISYWKIGL-PFPQNWRLLVENFTITKK- |
3 | 4s3jA | 0.13 | 0.12 | 4.24 | 3.06 | HHpred | | GQTIPMLVITNENNFSVTIQNKFITNILQTAEKY-----GMRDIHFDFESAPEDREAYNRFLRNVKIRLPSGYTLSTTLVPKFFEAHDYKAQGQIVDFVVIMTYDWGWQGGAISPIGPVKEVLQYAKSMPPQKIMMGQNLYGFDWKLPFGPAKAVSSAYNYDYFDNGVQHEVWFEDARSIQSKFNLMKEQGIGGISYWKIGL-PFPQNWRLL--VENFTI-- |
4 | 4s3jA2 | 0.12 | 0.12 | 4.27 | 1.02 | MUSTER | | GQTIPMLVITNIENSVILRDATIQNKFITNILQTAEK-YGMRDIHFDFESVAEDREAYNRFLRNVKIRLPSGYTLSTTLVPKFFEAHDYKAQGQIVDFVVIMTYDWGWQGGAISPIGPVKEVLQYAKSMPPQKIMMGQNLYGFDWKLPFPPAKAVSVPIRYDFTAQAPHFNYFDENARSIQSKFNLMKEQGIGGISYWKIGLP-FPQNWRLVENFTITKKG- |
5 | 5jh8A | 0.15 | 0.14 | 4.69 | 1.45 | CNFpred | | RMIPAYGCVSNVDIAHAVAQSQAVANLVMFAQDM-----RFSGINVDFEAVAGDRNNFSHFIQVLGRALHKGLMLIVSVPAF-NYGYDLRALGAAADYLQIMSYDEAIPPGPVAGSDWMEDDLDYAVERPAAKILNGIPAYGYDWMRPG-HSLTFNYGAA-----DGSRHTVWTENARSVALKASLVNAYGLGGTSLYALGM------EDDAFWAAVMQGLA |
6 | 4s3jA | 0.13 | 0.13 | 4.38 | 0.96 | HHsearch-2 | | GQTIPMLVITNIGNFSVTIQNKFITNILQTAEKY-----GMRDIHFDFESAPEDREAYNRFLRNVKIRLPSGYTLSTTLVPKFFEAHDYKAQGQIVDFVVIMTYDWGWQGGAISPIGPVKEVLQYAKSMPPQKIMMGQNLYGFDWKLPFGPAKAVSSAYNYDYFDNGVQHEVWFEDARSIQSKFNLMKEQGIGGISYWKIGL-PFPQNWRLLVENFTITKKG |
7 | 3cz8A | 0.15 | 0.14 | 4.58 | 1.16 | Neff-PPAS | | -RVTPLATITNLTSHQVLNNPTARTNLVNNIYDLVST-RGYGGVTIDFEVSAADRDLFTGFLRQLRDRLQAGYVLTIAVPIPWLRGYDYGGIGAVVNYMFIMAYDWHHAGSPVAPITEIRRTIEFTIQVPSRKIIIGVPLYGYDWIIPYQPGTVASAIS--------------NQNAIERAMRYQAPIQSAEYQSPFFRYSDQQGRTHEMSRKMQIVREYRL |
8 | 4s3jA | 0.13 | 0.12 | 4.24 | 1.55 | HHsearch | | GQTIPMLVITNENNFSVTIQNKFITNILQTAEKY-----GMRDIHFDFESAPEDREAYNRFLRNVKIRLPSGYTLSTTLVPKFFEAHDYKAQGQIVDFVVIMTYDWGWQGGAISPIGPVKEVLQYAKSMPPQKIMMGQNLYGFDWKLPFGPAKAVSSVYNYDYFDNGVQHEVWFEDARSIQSKFNLMKEQGIGGISYWKIGL-PFPQNWRLL--VENFTIT- |
9 | 4s3jA2 | 0.12 | 0.11 | 4.01 | 1.31 | PROSPECTOR2 | | TKRSVESIFEAKRDGEPTETAKIITNILQTAEKY-----GMRDIHFDFESAPEDREAYNRFLRNVKIRLPSGYTLSTTLVPKFFEAHDYKAQGQIVDFVVIMTYDWGWQGGAISPIGPVKEVLQYAKSQMPPQIMMGQNLYGFDWKLPFKQGNPPAKAVSSVFDENGVQHEVWFEDARSIQSKFNLMKEQGIGGISYWKIGL-PFPQNWRLLVENFTITKKG |
10 | 4s3kA | 0.15 | 0.12 | 4.09 | 1.86 | SAM | | --------------------DTLLNNIVKTAK-----EQNFRDIHFDFEFRPADKEAYIAFLQKAKKRLQDQLLMSVALAPKWYEAHDYKAIGEIANFVVPMTYE-GGPPMAVSPIGPVRDVLEYAVSIPSSKIIMGQNLYGYDWTLPYKPAKAISP-----YKDQQRTHEVWFEDARSIQAKFDLIKELKLRGMAYWKLGLD-FPQNWLL----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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