Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | LITEAAPSLEQQHRDRVRRYLTIMSLRIPCLIGAAVAYSVWHSWWLALLIIGVSIPLPWIAVLIANDRPPRT |
1 | 5ezmA3 | 0.08 | 0.08 | 3.25 | 1.13 | SPARKS-K | | ATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS |
2 | 4oo9A1 | 0.12 | 0.10 | 3.42 | 0.62 | FFAS-3D | | ------------ANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNVSLSATVALGCMFVPKVYIILAK---PER |
3 | 5doqB2 | 0.20 | 0.19 | 6.22 | 0.30 | HHpred | | LTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHAWML-VISFLFFVITVWLLRQRRFG- |
4 | 4ikvA | 0.14 | 0.14 | 4.75 | 0.84 | MUSTER | | AGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISLVGILGIIIPIIYFVVMYRSPKTT |
5 | 4he8G | 0.10 | 0.08 | 3.06 | 0.80 | CNFpred | | --------------KTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTL |
6 | 5doqB2 | 0.20 | 0.19 | 6.24 | 0.52 | HHsearch-2 | | LTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHAWM-LVISFLFFVITVWLLRQRRFGW |
7 | 5ezmA3 | 0.08 | 0.08 | 3.25 | 0.91 | Neff-PPAS | | VVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRP |
8 | 5doqB2 | 0.20 | 0.19 | 6.22 | 0.58 | HHsearch | | LTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNPEHAWML-VISFLFFVITVWLLRQRRFG- |
9 | 5doqB | 0.18 | 0.18 | 5.88 | 0.93 | SP3 | | LTYYADAAGDEQARALLRRYALLWSGPTMLSALLIIYQLRYHNWNVAWMLVISFLFFVITVWLLGRQRRFGW |
10 | 5gp9A2 | 0.06 | 0.06 | 2.50 | 0.42 | PROSPECTOR2 | | TTQLELRQSNTELRLKINEVLKGYLNLLDELLMEGKEKGYFFQETRLARQMIFGTLDEVVTNWVMKDCKYHR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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