Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MQLIQIDKARYRKHLNRVIVGCAASLAIGSLAISQTLIALFPDESGSHFHWNLLGVIVTSIGIGWLLNKYRTHPFMTEVVYVWELKQALNKITRKMAKLKAAGREGNPDALLAIHYSYAGSRLLWQLDDNTITMDDLAIKQAELDSVAAKYNLTLNADDYDDAIL |
1 | 5k7vA2 | 0.09 | 0.08 | 3.01 | 0.77 | SPARKS-K | | -------------TTEEFMARAISAIAELAKKAIEAIYRLADNHTTDKFMAIEAIALLATLAILAIALLASNHT--TEEFMAKAISAIAELAKKAIEAIYRLADNHEKAIEAIEKIARKAIKAIEMLAKNITTKEKAKSAIDEIREKAKEAIKRLEDNRT----- |
2 | 2oc5A | 0.16 | 0.15 | 5.06 | 0.97 | FFAS-3D | | -ALPDFTSDRYKDAYSRINAIVIAHDNYIAIGFTACGKNLGVEADQGKTPTCLLILIEAFAISAYHTYIPVSDPFARKIT-EGVVKDEYTHLNYGEAWLKANLESCREELLEANR---ENLPLIRRLDQVLQDKEDLIEDLIAYQESLTEIGFNTREITRAAAAL |
3 | 1dlcA | 0.12 | 0.09 | 3.22 | 0.33 | HHpred | | -----------------------KDVIQKGISVVGDLLGVVGFPF--------GGAL--VSFYTNFLNTIWPS------EDPWKMEQVEALMDQKIADYAKNKALAELQGLQNNVEDYVSALSSWQKNPVSSRPGRIRELFSQAESHFRNSMPSFAISGYEVLFL |
4 | 4z9hA | 0.12 | 0.12 | 4.03 | 0.80 | MUSTER | | LFFSSLVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNNAKVELLDSARKTLAQAATHYKKFKSMALPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQP-TQGMQNAMGEA------FAQYALSSEKLYRDIVTDN----ADDYR--FA |
5 | 5xanA | 0.11 | 0.09 | 3.32 | 0.67 | CNFpred | | ---------MLFAYYGLWFGLVGALGLLFSSIIILGILGGF------GATLTLPGIAGLVLTIGAAV--------DGNVISFERIKEELARGKGIKNAIGAGYEHSTAAILDVNASHLLSALALYNYSTAVKGFAVTLIIGVIASTFSNLVFAKWFMQWLAQRRP |
6 | 1dlcA | 0.12 | 0.09 | 3.23 | 0.41 | HHsearch-2 | | ---------------------TTKDVIQKGISVVGDLLGVVGFPF--------GGA--LVSFYTNFLNTIWPS------EDPWKMEQVEALMDQKIADYAKNKALAELQGLQNNVEDYVSALSSWQKNPVSSRPGRIRELFSQAESHFRNSMPSFAISGYEVLFL |
7 | 4z9hA | 0.10 | 0.09 | 3.36 | 0.74 | Neff-PPAS | | --QKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQ--------------PTQGMQNAMGEAFAQYALSSEKLYRDIVTDNADDYRF |
8 | 4ev6A | 0.07 | 0.03 | 1.25 | 0.46 | HHsearch | | ENFDMSMMDITLIKMNQI----MKILTMVTTIFPMWITGIYGMPLANNPQGFWLVMALMVVIIMIFVYIFRRSGWI----------------------------------------------------------------------------------------- |
9 | 3j1zP | 0.08 | 0.08 | 3.12 | 0.74 | SP3 | | YAIVPADHDHHGKAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPENATLGVVVSVVAIVLTLALVLLQKRWWWYIGQQAFDLGYRSIQALEDTRQRIKLIAKEPRVLGLHDLRTRQAGKTVFIQFHDGNLSLNEAHSITDTTGLRVKAADAEVVQVEPTTQ-- |
10 | 5cwqA | 0.10 | 0.10 | 3.62 | 0.73 | PROSPECTOR2 | | EELERESEEAERRLQEARKRSLAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALARASEKAQRVLEEARKVSEEAREQGDDEALIAIALAVLALAEVACCRGNKEEAERVEEEARKVKESAEEQGDSEVKRLAEEAEH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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