Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | PGLWLVGDEGVYIMSNGKLAEGKRPLVVYAQECDPKTNPDYWHYKRQHFGGDDGVEFLDAAELVKLINAAPSATHLTITMTDSALSL |
1 | 1u3bA1 | 0.09 | 0.08 | 3.09 | 1.01 | SPARKS-K | | KDVFIEKQKGVVIVESGWGSILPTVIIANMM------HGGPAEKSGK-LNIGDQIMSIPLSTCQSIIKGLKNQSRVKLNIVRCAMYR |
2 | 2izoB | 0.13 | 0.10 | 3.59 | 0.46 | FFAS-3D | | --NFIVTKEGIRVSGI----DPSRVVFLDIF------------LPSSYFEQEKEIIGFKLEDVNDILKRVLKDDTLILSSNESKLTL |
3 | 2g3wA | 0.18 | 0.17 | 5.62 | 0.26 | HHpred | | PDLWRRDYTGDPDLIDGQPDNRSREAVVIGY--GGQATETWWKKHANAGRYRLRVIELDSQATEALGALIQRG-RFDVIIQDGEVQL |
4 | 2q2aA2 | 0.14 | 0.14 | 4.69 | 0.84 | MUSTER | | TQVILVKGSPV-IGVQNATTGQEAAEKLFGKGPHIKKFETTVVAIMELLNGGDAV-ITDNAVANEYVKNNPNKK-LQVIEDPKNFAS |
5 | 2xurA | 0.09 | 0.07 | 2.63 | 0.91 | CNFpred | | GNLLLQVAGTLSLTGTDL-----EMEMVARVALVQ---------------HEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLV |
6 | 3c0uB | 0.20 | 0.20 | 6.24 | 0.39 | HHsearch-2 | | PEAWLRNDHLGIDLIEGLPDEQAAEVALFTYNSRA--AQIWWQQNQSKCVQFASVWYLDDEQLAKVSAFADRT-TLQATIQDGVIWL |
7 | 1u3bA1 | 0.10 | 0.09 | 3.39 | 0.77 | Neff-PPAS | | -DVFIEKQKGVVIVESGWGSILPTVIIANMM-------HGGPAEKSGKLNIGDQIMSINLSTCQSIIKGLKNQSRVKLNIVRCAMYR |
8 | 3tc9A3 | 0.15 | 0.06 | 1.94 | 0.38 | HHsearch | | ADSIITNDQNNYILTREGFK--VITELTKGQNCNGA--------------------------------------------------- |
9 | 5a8jA | 0.14 | 0.13 | 4.29 | 0.65 | SP3 | | VKIILLSD--------GKPTDKPKNVQLITIGLGEDYNEAIMKILADKGSG--VFYHINPSQLPTTLVEQKSDKNLTLNFSEG-LEV |
10 | 2w7rA | 0.10 | 0.09 | 3.40 | 0.42 | PROSPECTOR2 | | QPIVIHSSKNIRAIRVYVGDSDIYTVHHIVWNVEEGS-----PACQAGLKAGDLITHIVHTEVIELLL--KSGNKVSITTTNTETSV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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