Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LTQASFTNWAAGGENSVAVNGLLSTFANYKKGRSSWDNTLNLAYGMLKQGEDGVRKTDDRIDFMSKYGYKATERWYYAALVNFKTQFADGY |
1 | 3am2A2 | 0.11 | 0.10 | 3.57 | 0.75 | SPARKS-K | | NPAGNLYDWRSS--NSYPWTQKLNLHLTITATGQKYRILADFNIYSNNFNNLKLEQSDHYVDISLDAG-------QYVLVMKANSSYSGNY |
2 | 4qhwA1 | 0.14 | 0.13 | 4.48 | 0.46 | FFAS-3D | | ITQRGVTHWTQPTTADLSLYAKGHSEIKVSYGKKGFKVNLKVPVGSIDIRQA----GYVRIDLQGV--SKSGEGFGEIKQLIADNVTGKS- |
3 | 1i78A | 0.12 | 0.11 | 3.88 | 0.23 | HHpred | | -----FRDDIPNGERAIGKMPYIGLTGSYRYEDFEL--GGTFKYSWVESSDNHDGKDQNYYSVAVNAGYYVTPNAKVYVEGAWNRVTNKG- |
4 | 3afgA2 | 0.11 | 0.11 | 3.92 | 0.85 | MUSTER | | -AKLTFTGYVSNKGSTISGAGFVTATLYWDNSGSDLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPVSYSGS--ANYQVDVVSDGSLGQP- |
5 | 1pvlA | 0.06 | 0.04 | 1.93 | 0.87 | CNFpred | | ---------------ITLYKTTATSDSDK----LKISQILTFNFIKDKS----YDKDTLILKAAGNIYSGYTISSQFYWGSKYNISINSDS |
6 | 2wjqA | 0.11 | 0.11 | 3.93 | 0.45 | HHsearch-2 | | LDSSNGTRYGPYGDMSRDNVHRWDGYVTYHNSDFTFAWQT--TLY-SKQNDYRANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVGD |
7 | 2wjqA | 0.09 | 0.09 | 3.33 | 0.79 | Neff-PPAS | | -WTVRPGMLTHFSSNGTRYGPYVKLSWDATKD---LNFGIRYRYDWKAYDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYR |
8 | 4fqeA | 0.20 | 0.18 | 5.62 | 0.59 | HHsearch | | ASVYKFNVFSPGFSGSSNNNYRLTGNIDYTFLDYTIGYELEYKKG-----------TSYDITHNVKLSYKWDKNWKPYVEVGNVSRYRVG- |
9 | 1phoA3 | 0.13 | 0.09 | 3.05 | 1.01 | SP3 | | --------------------------AQYQFDF---GLRPSLGYVLSKGKDIEGIGDEDLVNYIDVATYYFNKNMSAFVDYKINQLDSDNK |
10 | 5e7fG | 0.11 | 0.11 | 3.97 | 0.47 | PROSPECTOR2 | | SYVAFFANKGSGNTVTFTCTAEVELFYHWGYSGGEWETQIYEATGYTNGHDNQAISMPTKAIYSGLKKRDANGRGGGPKHPMMIVKLYRNA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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