Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | DHTVQADIVFVIEGTAINGAYLNDLKTNYLLPTLEYFSQGNLEDRDYVCEGTSTLYGLVVYHAADILPKSSCDCYGPYSSPQKLLMTLDKLELIGGKGESHANIAEGLATALQAFEDLQQKREGNNIITQKHCILVCNSPPYFMPVMEASTYSGHTIDQLAAILNEQNINLSILSPRKIPAIFKLFEKAGGDLTQSQNKNYAKDPRHLVLLKGF |
1 | 6fpyA2 | 0.13 | 0.11 | 3.89 | 1.36 | SPARKS-K | | ----NKNVVFVIDISGSMRGQKVKQTKEALLKILGDM-------------QPGDYFDLVLFGTRVQSWKGSLVQASE-ANLQAAQDFVRGFSLDEA-----TNLNGGLLRGIEILNQVQESLPELS-NHASILIMLTDGDP------TEGVTDRSQILKNVRNAIRGRFPLYNLGFGDFNFLEVMSMENNGRAQRIYEDHDATQQLQGFYSQVA |
2 | 4um8B2 | 0.12 | 0.10 | 3.50 | 1.80 | FFAS-3D | | ----PVDLYYLMDLSASMDDDLNTIKEL-GSRLSKEMSK----------LTSNFRLGFGSFVEKPVSPFVKTHILPLTNDAERFNEIVKNQKISANIDTPEG-GFDAIMQAAVCKEKI-----GWRNDSLHLLVFVSDADSHKNEYSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEVHLYENYAKLIPGATVGLLQKDSG------------ |
3 | 3vi3B2 | 0.10 | 0.08 | 3.12 | 1.79 | HHpred | | ---YPIDLYYLMDLSYSMKDDLENVKSL-GTDLMNEMRRI----------TSDFRIGFGSFVEKTVMPYPYKNVLSLTNKGEVFNELVGKQRISGNL-DSPEGGFDAIMQVAVCGSLIGW-----RN-VTRLLVFSTDAGFHFAGDGKDHYYDYPSIAHLVQKLSENNIQTFAVTEEFQPVYKELKNLIPKSAVGLSASSNVI----------- |
4 | 6fpyA2 | 0.15 | 0.13 | 4.24 | 1.46 | MUSTER | | ----NKNVVFVIDISGSMRGQKVKQTKEALLKILGDM-------------QPGDYFDLVLFGTRVQSWKGSLVQASE-ANLQAAQDFVRGFSLDEA-----TNLNGGLLRGIEILNQVQESLPE-LSNHASILIMLTDGDPTE------GVTDRSQILKNVRNAIRGRFPLYNLGFVDFNFLEVMSMENNGRAQRIYEDHDATQ-----QLQGF |
5 | 4wfqA | 0.11 | 0.09 | 3.19 | 1.27 | CNFpred | | QRGIIRSLILTLDCSEAMLEKRHAMIIQYAIDFVHEFFDQN----------PISQMGIIIMRNGL-----AQLVSQVSGNPQDHIDALKSIRKQEP--KGNPSLQNALEMARGLLLPVPA-------HCTREVLIVFGSLSTTDPG---------DIHQTIDSLVSEKIRVKVLGLSQVAICKELCKATNYGDE-----------SFYKILLDE |
6 | 4um8B2 | 0.12 | 0.10 | 3.49 | 1.06 | HHsearch-2 | | ---YPVDLYYLMDLSASMDDDLNTIKE-LGSRLSKEMSKL----------TSNFRLGFGSFVEKPVSPTFFKHILPLTNDAERFNEIVKNQKISANI-DTPEGGFDAIMQAAEKIGW--------RNDSLHLLVFVSDADSHFGMDSKSTVLEYPTIGQLIDKLVQNNVLLIFAVTEQVHLYENYAKLIPGATVGLLQ----KDSG-------- |
7 | 6fpyA2 | 0.14 | 0.11 | 3.69 | 1.48 | Neff-PPAS | | ----NKNVVFVIDISGSMRGQKVKQTKEALLKILGDM-------------QPGDYFDLVLFGTRVQSWKGSLVQAS-EANLQAAQDFVRGFSLDEA-----TNLNGGLLRGIEILNQVQESL-PELSNHASILIMLTDGDPTE------GVTDRSQILKNVRNAIRGRFPLYNLGFGHFNFLEVMSMENNG---------------RAQRIYED |
8 | 3vi3B2 | 0.10 | 0.09 | 3.26 | 1.60 | HHsearch | | ---YPIDLYYLMDLSYSMKDDLENVKS-LGTDLMNEMRRI----------TSDFRIGFGSFVEKTVMPPFYKNVLSLTNKGEVFNELVGKQRISGNL-DSPEGGFDAIMQVAVLIGW--------RN-VTRLLVFSTDAGFHFAGDGKSHYYDYPSIAHLVQKLSENNIQTFAVTEEFQPVYKELKNLIPKSAVGTL----SANSSNVIQLID- |
9 | 1atza | 0.14 | 0.11 | 3.67 | 1.49 | PROSPECTOR2 | | ---QPLDVILLLDGSSSFPASYFDEMKSFAKAFISKA----------NIGPRLTQVSVLQYGSIT----TIDVPWNVVPEKAHLLSLVDVMQREGGPSQ----IGDALGFAVRYLTS---EMHGARPGASKAVVILVTDVSVD------------SVDAAADAARSNRVTVFPIGRYDAAQLRILAGPAGDS--------------NVVKLQRI |
10 | 3vi3B2 | 0.12 | 0.09 | 3.16 | 1.61 | SAM | | ----PIDLYYLMDLSYSMKDDLENVKSL-GTDLMNEMRRI----------TSDFRIGFGSFVEKTTTPFSYKNVLSLTNKGEVFNELVGKQRISGNL-DSPEGGFDAIMQVAVLIGW--------RN-VTRLLVFSTDAGFHFAGDG---KYDYPSIAHLVQKLSENNIQTFAVTEEFQPVYKELKNLIPK----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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