Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | FMALVLVFQLTGCGDKEADQRKAFIDFLQNTVMRSGEHLPSLSEDQKQKFGNYVSDYAIIYGFSQQVNRAVDSGMKPVVDELSAIRTPQDYLTRRDSLRQASGSLGVLTQQIQAAKTQADSSKAALKQPEELKTVYDNVYNKVVTQPANALQPLLPALQTLSQDAVQTGDFLQQQGSKVTFNGPAIQFPTQQQAEQYNTLMQNLSSNAQVLGQAQSAMQ |
1 | 2odvA | 0.18 | 0.15 | 4.92 | 1.18 | FFAS-3D | | ----------------ELQLRLLLLQWMRHHTAAFEERFPSSFEEIEILWSQFLKDKNRSKGIYQSLEGAVQAGPLDVEKEWGKL--HVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSDVRLLAGKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHP--------------QGEQMYRRVYRLHKRLVAIRTYNLRLK |
2 | 2yfaA | 0.10 | 0.10 | 3.57 | 1.13 | Neff-PPAS | | LRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYI--AENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVR-QFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER- |
3 | 5cwpA | 0.12 | 0.11 | 4.00 | 0.78 | SPARKS-K | | ERAKEAAERAQEAAERTRELARELKRLAQEAAEEVKRD-PS-SSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRVEAAEEVQRNPSDVNEALKLIVEAIEAAVRALEAAERTPEVRELARELVRLAVEAAEEVQRNPSEEVNEALKKIVKAIQEAVESLREAEESGDP----------------EKREKARERVREAVERAEEVQRDPS |
4 | 1cunA | 0.10 | 0.09 | 3.22 | 1.16 | FFAS-3D | | ---------------RDMDDEESWIKEKKLLVSSED--YGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT-GKKLSD--DNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNH---HVENITAKMKGLKGKVSDLEKAAAQRKAKLDENSA--- |
5 | 6ek4A | 0.14 | 0.10 | 3.41 | 0.28 | HHpred | | -----------------VVDRNKIQVIRQYNLADFKDYIP--NISDLDKLDLANPKKELIK---QAIKQGV-EIAKKILGNISKGLKYIELADARAKLDERINQINKDCDDLKIQLKGVEQRIAGIEQIDKERTTLLLQAAKLE----QAWNIFAKQLQQLTKIIHKQLDFLDDLALQY---------------------------------------- |
6 | 2yfaA | 0.09 | 0.09 | 3.30 | 0.97 | MUSTER | | LNKDLTDLRIAR-NGDDAANTLAKLDAFSKQQAYLATTFKSLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMADSVRLAQYQLISKARQQLLQVRIDVRGYIAENS------SANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVR-QFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER- |
7 | 1hciA | 0.13 | 0.12 | 4.30 | 0.79 | CNFpred | | EQIAAIAQELNELDYHDAVNVNDRCQKICDQWD----RLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPWMEGAMEDLQ-IEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSY-TMDELRTKWDKVKQLVLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQ |
8 | 1vt4I3 | 0.11 | 0.07 | 2.63 | 0.62 | HHsearch-2 | | ----------------EYALHRSIDHYNIPKTFDSDDLIPPYLD-------QY--FYSHI---------------GHHLKN----------IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNSILNTLQQLKF-----YKPY----------ICDNDPKYERLVNAILDFLPKIEENLICSK-------YTDL----LRIALMAEDEAIFEEAHKQVQ |
9 | 5nnvA | 0.07 | 0.07 | 2.78 | 1.01 | Neff-PPAS | | --------------KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTS--ESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRI |
10 | 1zdbA | 0.18 | 0.03 | 1.04 | 0.37 | HHsearch | | ----------AVAQSFNMQQQRRFYEALH---------DPNLNEEQRNAK-------------IKSIRDD----------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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