Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKICGVELKGNDAVICLLDHSDNVMHLPDCRVAKISIGNANSTEEVKKFQFSFAKLVEDYKVEKVVIRQRQTKGKFAGGAVGFKLEAAIQLINDLQVEVVSPTQIKESLKKNPLAISFKETGLKQYQEQAFTTAYA |
1 | 1hjrA | 0.11 | 0.10 | 3.74 | 1.19 | SPARKS-K | | AIILGIDPGSRVTGYGVIRQVGR--QLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAQELPVFEYAARQVKQTVVG---IGSAESQVQHMVRTLALAIAIT |
2 | 4ep4A | 0.13 | 0.12 | 4.36 | 1.20 | FFAS-3D | | MVVAGIDPGITHLGLGVVAVEGKGALKARLHGEVVKTSPQEPAKEVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAGVPVYAYGPMQVKQALAGHGHALGLKEAPRPSHLADALAIA-- |
3 | 1hjrA | 0.14 | 0.13 | 4.51 | 1.10 | MUSTER | | AIILGIDPGSRVTGYGVIRQVGRQLSYLG--SGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQFMAKNADSALKLGQARGVAIVAAQELPVFEYAARQVKQTVVGIGSA------EKSQVQHMVRTL-LP |
4 | 1hjrA | 0.11 | 0.11 | 3.94 | 1.51 | HHsearch | | AIILGIDPGSRVTGYGVIRQVGRQLSYLGSG--CIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIE-QVFMAKNADSAKLGQARGVAIVAQELPVFEYAARQVKQTVVGIGSALKLPAN-PQADAADALAIAI- |
5 | 4ep4A | 0.13 | 0.13 | 4.56 | 1.14 | SPARKS-K | | MVVAGIDPGITHLGLGVVAVEGK--GALKARLHGEVVKTSPAKERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAGVPVYAYGPMQVKQALAHGHAALGLKEAPRPSHLADALAIALT |
6 | 1hjrA | 0.10 | 0.10 | 3.54 | 1.11 | FFAS-3D | | AIILGIDPGSRVTGYGVIRQVGRQLSYL--GSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAQELPVFEYAARQVKQTVVGIG---SAEKSQVQHMVRDALAIAI- |
7 | 4ep4A | 0.14 | 0.14 | 4.74 | 1.27 | HHsearch | | MVVAGIDPGITHLGLGVVAVEGKKARLLHGE--VVKTSPQPAKERVGRIHARVLEVLHRFRPEAVAVEE-QFFYRQNELYKVGWALGAVLVAAGVPVYAYGPMQVKQALAGHGHALGLKEAPRPSHLADALAIAL- |
8 | 5e6fA | 0.13 | 0.11 | 3.81 | 0.84 | SPARKS-K | | TIICSVDIGIKNPAYTIFRYEDSKVSLIAIEKS----DWSDNW------EYNVTKDLTKYNPDIIVLEKQGYRSPNA-----KIIYFIKGFFTNTSVIVRNPKQSVITFMDKLSK--------LDDIADSFNLGIA |
9 | 5e6fA | 0.15 | 0.14 | 4.68 | 0.92 | FFAS-3D | | TIICSVDIGIKNPAYTIFRYEDS-------KVSLIAIEKSDWSDNWEY---NVTKDLTKYNPDIIVLEKQGYRSPNA--KIIYFIKGFF-YNTNTSVIVRNPTFQYSDRKKQSVITFMDKLSKLDDIADSFNLGIA |
10 | 1hjrA | 0.13 | 0.12 | 4.33 | 0.86 | HHpred | | AIILGIDPGSRVTGYGVIRQVGRQLSYLGSG--CIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQ-VFMAKNADSAKLGQARGVAIVAQELPVFEYAARQVKQTVVGIGSA-E-K-SQVQHMAADALAIAIT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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