Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | VLDRVAARVVADQIATRAQNAENLAERPDVSLGGFPFLTQVVAGRYRDVELEVHGYEQDGTRVDRVHADLTGVRLPLSDVLRGEVERVPVDRVDAEVDLTFNDLNAYLASQNSQLKVSPAGQGIQIGGTVDLLGTPYPVSGTADIGVAPDAVTFTPRELAPDLEALIPPGLLDTVRSLLTVRVPVAGLPFNMKLRSATVRADRLTFAA |
1 | 3l6iB | 0.12 | 0.07 | 2.53 | 0.67 | SPARKS-K | | --------------------------------------------------------------------------------------HHHSHNQLTQYTITEQEINQSLAKHNLTSQIGREPNKVTLTGDANLGSQKATLKLKALPVFDKGAIFLKVVDATVQPEQTLLPYLNQALRNYFNYVLREDGEAAKKLAKGIEVKPGEIVIPF |
2 | 1bp1A1 | 0.10 | 0.09 | 3.18 | 0.86 | FFAS-3D | | ISQKGL-DYASQQGTAALQK-------------------ELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKIS------------GKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSVHVHISKSKVGWLIQLFHKKIESALRFQTLPVMTKIAPPATTAETLDVQ- |
3 | 3l6iB | 0.12 | 0.07 | 2.36 | 0.33 | HHpred | | ---------------------------------------------------------------------------------------------LTQYTITEQEINQSLAKHGVHSQIGREPNKVTLTGDANLFGAT-KLKLKALPVFDKGAIFLKE-EVVVQPKQTVQPYLNQALRNYFQPAYVLREDGAKKLAKGIEVKPGEIVIPF |
4 | 3ucpA2 | 0.12 | 0.11 | 3.73 | 0.70 | MUSTER | | --------LAKANATKLLRTEYAY------KLE--NGTFDVAKGEL-TFTVNWHSDVAQDPKVKEFWVSLTAFN-GTEYTMGPRPSNGTLGRSENRISV---NLAKVETNAN--LTAVPNGSKVTYTLTGIKAVIGTSSVPYKQIVSIGKGFMDGKLLICANSAELDPTMDAAIDCSNTEAPI----YEVIVGSNKASFSADASNVTA |
5 | 1bp1A | 0.08 | 0.05 | 2.12 | 1.03 | CNFpred | | --LDYASQQGTAALQKELKRIKIPDYSDSFKIK-----------HLGKGHYSFYSMDIREFQLPSSQISMVPN----------VGLKFSISNANIKISGK--------------WKAQK--RFLKMSGNFDLSIEGMSISADLKLGSNPGKPTITCSSCSSHINS-KVGWLIQLFHKKIESAL------------------------- |
6 | 3l6iB | 0.12 | 0.07 | 2.39 | 0.68 | HHsearch-2 | | -------------------------------------------------------------------------------HHHSHNQ-------LTQYTITEQEINQSLAKHGVHIQIGREPNKVTLTGDANLFGAT-KLKLKALPVFDKGAIFLKE-EVVVQ-PEKVQTPYLNQARNYFQPAYVLRGSAAKKLAKGIEVKPGEIVIPF |
7 | 3jc8Na | 0.07 | 0.07 | 2.91 | 0.74 | Neff-PPAS | | -------VRAVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMMDALASATPKKVWVKTFSENNNAVSIDGSAVSHDEVAEFMRGLNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQVSPFFKNIDLQTAKQVGGAQVGVP |
8 | 3l6iB | 0.11 | 0.06 | 2.25 | 0.91 | HHsearch | | -------------------------------------------------------------------------------HHHSHNQ-------LTQYTITEQEINQSLAKHGVHSQIGREPNKVTLTGDANLFGQT-KLKLKALPVFDKGAIFLKE-EVVVQ-PEKQVQPALRNYFNQ-QPAYVLRGSGAKKLAKGIEVKPGEIVIP- |
9 | 3gwzA1 | 0.07 | 0.06 | 2.40 | 0.74 | SP3 | | RELFNRAGSVSLTEAGQVAAAYDFSGAAAVDIRGS--LAAVLD-AFPGLRGTLLERPPELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLH--DWDDDDVVRILRR----IATAKPDSRLLVIDNLIDERPAASTLFVDLLLL-----------VLVGGAERSESEFAALLEKS------------GLRVERSLPAGPVRIVEI |
10 | 3uauA1 | 0.10 | 0.09 | 3.43 | 0.69 | PROSPECTOR2 | | IDEKTVKKYENQLNQTVKQEIASLSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLAKDNNDEYQELFQAKNIKIRSNEIYKGEQKSIQSNLVFEDFKLGEKVVSDINASLFQQNKLSSDSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINL--------KEDLLNYLDSKGIKFNTQTLAMDEQAINELLNSDFIILNN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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