Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MLHLLYILAFTILAFIAVGNLIRNLIMFSFERERSYPTNYSSKNQFIPHPELLDNAGNLIKEPLLVMR |
1 | 3dl8C | 0.06 | 0.03 | 1.28 | 1.38 | SPARKS-K | | TISVIIFSLAIGVYLWILDLTFTKIISFILSLR----------------------------------- |
2 | 6iptA2 | 0.14 | 0.13 | 4.51 | 1.11 | MUSTER | | SHHYAFHVSDEEFDTIFARIKQAGLEYSSDPMHHNKGEINHRKGGRGFY--FYDPNGHNL--ELLTLS |
3 | 3dl8E | 0.08 | 0.07 | 2.94 | 1.13 | SPARKS-K | | -LFVIIAVVLIISTLLQKGRGDVGAAFGGGMGQSIFGVGGVETILTKATYWLGALFLVLALLLSVI-- |
4 | 4dxwA | 0.19 | 0.09 | 2.84 | 0.40 | FFAS-3D | | ---WVYFFSFIIICSITILNLVIAILVDVVIQKK---------------------------------- |
5 | 6nbqG | 0.14 | 0.10 | 3.51 | 0.26 | HHpred | | ---SDFLLPFELASVLLLMALI-GAVVLARRELVL-----EPEPILVPPLELPERPREP--------- |
6 | 6a52A2 | 0.13 | 0.12 | 4.10 | 1.07 | MUSTER | | PQHYAFLVGDSEFDEIFGRIRERGLDHWADPGHRRPGEINTNDGGRGVY--WSDPDGHSL---ILTRP |
7 | 2a65A | 0.13 | 0.06 | 2.04 | 0.60 | CNFpred | | FLGFLWFFLLFFAGLTSSIAIMQPMIAFLED------------------------------------- |
8 | 2q4zA1 | 0.27 | 0.15 | 4.51 | 0.36 | HHsearch-2 | | -------------------------------EKVDYPRNESGDVAAVIHPNLQDQDWKPLHDPVFVSL |
9 | 5jqzA | 0.10 | 0.10 | 3.78 | 0.95 | Neff-PPAS | | SRMLKALIEIAKAIWKALWANSLLLEATSRGDTERMRQWAEEARKIYKEAEKIIDRADEIVEEAKKRH |
10 | 1s20G1 | 0.24 | 0.13 | 4.12 | 0.42 | HHsearch | | -----------------------SSFSYG--LE-----VNRLAGRQLPVDGGFDDEGNLTKEPGVIE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|