Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LITDEQRARLLANGRAHAEGQELDPLPVVKLFTPDAHATWLLTELDPEDGDTAFGLCDLGLGMPELGCVRLSELENVRGPLNLPIERDLYFIAQRRLSEYAQLARANGSII |
1 | 1yb3A | 0.16 | 0.14 | 4.81 | 0.83 | SPARKS-K | | ELLNRIWGDIFELREELKEELKGFPHPAFAVATPQG--FYFVFAFPKEELSFIYGFYNFEHPI------SGDEVWDRIVNSEINFEVDLGFDVKREIKRFIELARRYNLL- |
2 | 5m9nA1 | 0.15 | 0.10 | 3.32 | 0.49 | FFAS-3D | | ---AELQASLSKYCDQLPPRSDFYPAICCAQFSEDDQ--WYRASVLAYASEESVLVGYVDYGNFEI--LSLMRLCPII--------------------------------- |
3 | 1j08A | 0.09 | 0.07 | 2.79 | 0.22 | HHpred | | LISEEDKRIIKEEFFS----KMVNPVKLIVFIGEHCQCDQLKQLVQELTDKLSYEIVDFDDRAPATTITQD-------GK-DFGVRYFGIPAGHE-FAAFLEDIVDV---- |
4 | 3cjpA | 0.15 | 0.14 | 4.58 | 0.74 | MUSTER | | AVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKE------LTNVIQAYPSRYVGFGNVPVGLSEND--TNSYIEENIVNNKLVIELTPASGQIKSLKPIFKYSMDSGSLP |
5 | 3tcvA | 0.16 | 0.14 | 4.50 | 0.65 | CNFpred | | --RAEFEPWLDKASKSD------DPLFFAVIDKA-VAGRQALMRIDPANGVIEIGSIYWG-SRRPAATEAQFLFMQYVGYRRYEWECHNE------NGPSRRAAERFGFRF |
6 | 4atnA1 | 0.22 | 0.11 | 3.41 | 0.38 | HHsearch-2 | | KFTVPLRAALRDAGVLA--NYETPKRPVVHVFFIAPG-CYTGYSYSNNNSPFYMG-------IP----------------------------------------------- |
7 | 1kanA1 | 0.12 | 0.11 | 3.86 | 0.86 | Neff-PPAS | | -MTREERMKIVHEIKERILDKYGDDVKAIGVYGPYSDIEMMCVMSTEEAEFSHEWTT--GEWKVEVNFYSEEILLDYASQVEHGQFFSPIYDSGGYLEKVYQTAKSV---- |
8 | 2p6cA | 0.20 | 0.16 | 5.18 | 0.45 | HHsearch | | RITDEVKKAVEESEVK--EG-------LCLVSSMHLTSSVIIQDDEEGLEDIWEWLEKL---APYRDYKHDAHLKNLNGKLGPEAEFDG---QRPRVVI--KI---IGE-- |
9 | 1hqbA | 0.06 | 0.05 | 1.92 | 0.96 | SP3 | | -ADEAIKNGVLDILADLTGSDDVKK--------------------NLDLN-----LFETGLLDS----MGTVQLLLEQSQFGVDAPSEFDRKEWDTPNKIIAKVEQAQ--- |
10 | 3kl1A | 0.13 | 0.13 | 4.38 | 0.51 | PROSPECTOR2 | | L-TDEEQKTLEPVIKTYHQFEPDPTTCTSLIVISGLPASTSLEFVDDDHRVLSFRVVGGEHRLKNKSVTSVNEFLNDSGKVYTVVLESYTVDIPEGLQKLGVAATSAPM-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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