Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MDDIVRQALAKWPNVPHCTGWLLLDRRGQWRLRDDAAQAAGEPGSPVRHAALNAFIARNYECDAHGQWFFQNGPQRVYVELAYTPWIVRLAERDSRLALTDHTGAPFEPAQAWLDDAGGVLFRDTGTPPRIAALHDHDLGLFADHADFDAAPPVLRWRDGCALPLDSIARADVPARFGFVASPA |
1 | 2re3B | 0.14 | 0.12 | 4.07 | 1.91 | SPARKS-K | | LLASARAIVHLW-NPPFNGDIDRIARDGTWFYQGT----------PINRPA-VRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEVKQVLTFTTHVGDSAVANPIRAQGEPAPYVHVRA--GLEALIDRKSFYRL----DLGEIGWFGLWSSGSFFPLTVEELERG----------- |
2 | 2re3B | 0.15 | 0.13 | 4.36 | 1.23 | FFAS-3D | | ADGLLASAVHLW-NPPFNGDIDRIARDGTWF----------YQGTPINRP-AVRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVERKQVLTFTTHVGDSAVAGEGNPTGEPAPYVHVRAG--LEALIDRKSFYRLDLGEIEDGW--FGLWSSGSFFPLTVEELER------------ |
3 | 2re3B | 0.14 | 0.12 | 4.07 | 2.64 | HHpred | | ADGLLASPVHLW-NPPFNGDIDRIARDGTWFYQGT----------PINRPA-VRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEVGQVLTFTTHVGDSAGENPIRAQDEPAPYVHVR--AGLEALIDRKSFYRL-DLGEIED--GWFGLWSGSFFPLTVEELER------------ |
4 | 2re3B | 0.18 | 0.15 | 4.95 | 1.44 | MUSTER | | ADASARAIVHLW-NPPFNGDIDRIARDGTWFYQ----------GTPINRPA-VRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEVKQVLTFTTHVGDSAVA-----GEGNPIRAQDPATGAGLEALIDRKSFYRLDLGEIEDGW-FGLWSSGSFFPLTVEELERG----------- |
5 | 2re3A | 0.12 | 0.10 | 3.44 | 2.16 | CNFpred | | ---------HLWNPPFNGDIDMRIARDGTWFYQG----------TPINRPAMVRLFSSILKREE-DRFYLVTPVEKVGIRVDDAPFVAVDVEVAQVLTFTTHVGDSAVANPIRMAQEPAPYVHVRA--GLEALIDRKSFYRLMDLGEIE--DGWFGLWSGSFFPLMTVEEL------------- |
6 | 2re3B | 0.15 | 0.12 | 4.22 | 3.77 | HHsearch-2 | | ADGLLASAVHLW-NPPFNGDIDRIARDGTWFYQGT----------PINRPA-VRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEVGQVLTFTTHVGDSAGENPIRAQDEPAPYVHVR--AGLEALIDRKSFYRL-DLGEIED--GWFGLWSGSFFPLTVEELERG----------- |
7 | 2re3B | 0.16 | 0.14 | 4.50 | 1.34 | Neff-PPAS | | --DGLLASARAIWNPPFNGDIDRIARDGTWFYQ----------GTPINRP-AVRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEVAQVLTFTTHVGDSAVA-----GEGNPIRAQDPATGAGLEALIDRKSFYRLDLGEIEDG-WFGLWSSGSFFPLTVEELERG----------- |
8 | 2re3B | 0.14 | 0.12 | 4.07 | 5.78 | HHsearch | | ADGLLASPVHLW-NPPFNGDIDRIARDGTWFYQGT----------PINRPA-VRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEVGQVLTFTTHVGDSAGENPIRAQDEPAPYVHVR--AGLEALIDRKSFYRL-DLGEIED--GWFGLWSGSFFPLTVEELERG----------- |
9 | 2re3A | 0.14 | 0.11 | 3.92 | 1.09 | PROSPECTOR2 | | SADGLLASARAIKNPPFNGDIDRIARDGTWFYQGT----------PINRPA-VRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEVKQVLTFTTHVGDSAVAGQDPATGEPAPYVHVR--AGLEALIDRKSFYRL-DLGEIEDG--WFGLWSGSFFPLTVEELE------------R |
10 | 2re3B | 0.15 | 0.11 | 3.65 | 1.50 | SAM | | -------------NPPFNGDIDRIARDGTWFYQGT----------PINRPA-VRLFSSILKREEDR-FYLVTPVEKVGIRVDDAPFVAVDVEV-QVLTFTTHVGDSA--GPIRAQDEPAPYVHVR--AGLEALIDRKSFYRL-DLGEI--EDGWFGLWSGSFFPL------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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