Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ARLAALKTMKTSELKAKWRELFDSEPPPFNRRYLESRLAYRIQELAYGGLKPETVRRLEKLGEDLDGGDRKKSRVRADLTPIAGTRLIREWQGVEHVVTVTADGFEWQGRPYKSLSAIARAITGTRWNGWVFFGLK |
1 | 1p4eB1 | 0.13 | 0.10 | 3.57 | 1.00 | SPARKS-K | | SQFDILCKTPPKVLVRQFVERFE-RPSGEKIASCAAELTYLCWMITHTAIKRATFMSYNTIISNSLSFDIVNK------------SLQFKYKAWEFTIIPYNGQKSDITDIVSSLQLQFES--------------- |
2 | 2p4vA | 0.17 | 0.14 | 4.62 | 0.69 | FFAS-3D | | QELNYLWREERPEVTKKVTWAASLGDRSENAD-------YQYNKKRL----REIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIENDGVTHRFRIVGYDEIFRKDYISIDSPMARALLKKE---------- |
3 | 1grjA | 0.15 | 0.13 | 4.45 | 0.26 | HHpred | | -----MTLRGAEKLREELDFLKSVR---------RPEIIAAIAAREHGDLKENARGRIKDIEAKLSNAQVIDVTKPNNGRVIFGATVTVLNSDEEQTYRIVGDEADFKQNLISVNSPIARGLIGKEEDDVVVI--- |
4 | 4uavA | 0.11 | 0.10 | 3.68 | 0.66 | MUSTER | | NDTFKERDLNVTWDVDLYGELLKI----GGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVALVDQALTNGVKVAVCSTSNE------KAVSAIVSCLLGPE----RAEKIK |
5 | 3pjpA | 0.13 | 0.10 | 3.30 | 0.57 | CNFpred | | ----------LDQIIVEYLQN--------KIRLLNELTSNEK---FKAGTKKEVVKFIEDYSKVNPKKSVYYFSLN----ENPGWFYLIFKKLYIWNVKLTHTGFFLVNYNYPTVIQLCNGFK------------- |
6 | 2avuE1 | 0.22 | 0.05 | 1.62 | 0.51 | HHsearch-2 | | QMLESETQLSRGRLIKLYKELRGSPPPKMLPF-------------------------------------------------------------------------------------------------------- |
7 | 3ba6A3 | 0.15 | 0.13 | 4.48 | 0.98 | Neff-PPAS | | --LTTNQDPPRKEVMGSIQLCRDAGIRTGDNKGTAIAICRRIGIFGENEDRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-----------SGTA |
8 | 2avuE1 | 0.22 | 0.05 | 1.62 | 0.57 | HHsearch | | QMLESETQLSRGRLIKLYKELRGSPPPKMLPF-------------------------------------------------------------------------------------------------------- |
9 | 3hdiA1 | 0.06 | 0.03 | 1.27 | 0.88 | SP3 | | GTVETLNSFNEGMLRHYMDRFYTGDYVVIS---------------VAGNVHDELIDKIKETFSQVKPTTYNYQGEKPMFL-------------------------------------------------------- |
10 | 1q87A | 0.11 | 0.10 | 3.75 | 0.58 | PROSPECTOR2 | | SEQETF----RAKVDEIWFRLTQKTDGTVMRDFLIEKAAEYFKQNAIEGPYETIMLKIASLLLISNNKGHWLTFDPQDSIQNEPNCLILKTPTGIRKIWNKTGQYLMNGEKYDSWDKYFEMKPIAYPTFAPMHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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