>PF11138 (145 residues) SPSATAYQKIGTTDVTINYSRPGVKGRTIWGGLVPYNELWRTGANAATNIEFSTDVVVEG NKMPAGKYALFTIPSEKEWTVVINKNWEQGGTAEYAEADDVVRFKVTPKKVDHSHEWMFF TFFAQSKNSAKAILAWEKLMVPFTI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | SPSATAYQKIGTTDVTINYSRPGVKGRTIWGGLVPYNELWRTGANAATNIEFSTDVVVEGNKMPAGKYALFTIPSEKEWTVVINKNWEQGGTAEYAEADDVVRFKVTPKKVDHSHEWMFFTFFAQSKNSAKAILAWEKLMVPFTI | |||||||||||||||||||
1 | 3on9A | 0.09 | 0.08 | 2.86 | 0.75 | SPARKS-K | -------GSFNSIDVEINMYPVNKTSCN-------------SSIGSSSTISTSETITLTHEDCTPVFIGDYYSVVDKLATSGFFTNDKVHQDLT---TQCKINLEIKCNSGRPHSETVTVVL-----SNLDVYIVYANDVVAYHT | |||||||||||||
2 | 1zlgA3 | 0.10 | 0.08 | 3.08 | 0.54 | FFAS-3D | PRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWDERVQLTD--IRPSRYQFRVAA--------VNVH----GTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWD-------- | |||||||||||||
3 | 3ottA3 | 0.14 | 0.08 | 2.83 | 0.34 | HHpred | -YTNSIKLKYDQNNLSFELSDLPYSLDNKFVRLEGMDKEWNFLKSNINRITYSN--------LSYGNYQLIISKLER---------DGQPSN-----RPHILNIRILPP------------------------------------ | |||||||||||||
4 | 4aq1A5 | 0.19 | 0.16 | 5.11 | 0.80 | MUSTER | ---VLQDIKVDATSVKLSDEAVG-------GGEV-------EGVNQK-TIKVSA-VDQYGKEIKFGTKGKVTVTTNTEGLVIKNVNSDNTIDFD-SGNSATDQFVVVATKDKIVNGKVEVKYFKNASDTTP-----STKTITVNV | |||||||||||||
5 | 6fayA | 0.08 | 0.07 | 2.73 | 0.77 | CNFpred | --AITVDIESSEEDVSITSNLSS--IDSFYTMVQDLRNSYQIGYDGSLRIFYALDSHYQTEPHVLAGTANPTVA---KRNMTLPGE----------NGQNLVEWRFRKEQAQGKVNVFGRKLRVN--GRNLLSVDFDRKTEKIYD | |||||||||||||
6 | 4a2lA | 0.09 | 0.08 | 3.20 | 0.45 | HHsearch-2 | LSQRSVRSIMGGMWLGLNIRNPSLSDNVVSCIVEKDKNLWIGTNDGIKAVYVDEK----KSLVYIGTHGLSILHRSGQVEILPDGEGNLWALVRFNPEQRSFTTIEKEKTPVVSKQITTL-FRDSHKEEGSITLKSWQTAFSIEF | |||||||||||||
7 | 2f6aA2 | 0.12 | 0.10 | 3.63 | 0.85 | Neff-PPAS | ------------------------SARDISSTNVTDLTVSPSKIEDGGKTTVKMTFDDKNGKIQNGDMIKVAWPTSGTVKIEGYSKTEQVGQAVITPDGATITFNDKVEKLSDVSGFAEFEVQGRTSDDKVATITSGNKSTNVTV | |||||||||||||
8 | 3v9fA3 | 0.12 | 0.07 | 2.45 | 0.43 | HHsearch | ISEGEIELTHEQNSFNLTFNVQDYSLAVEYAYLKGLENSWYTIN-EQNSVTFRN--------IPPGKYEFLVKARL---------HNQDWSE-----DTTSLRIHINP------------------------------------- | |||||||||||||
9 | 4aq1A5 | 0.16 | 0.13 | 4.37 | 0.88 | SP3 | ---VLQDIKVDATSVKLSD--------------EAVGGGEVEGVNQK-TIKVSA-VDQYGKEIKFGTKGKVTVTTNTEG--LVIKNVNSDNTIDFDSGNATDQFVVVATKDKIVNGKVEVKYFKNASDTTPT----STKTITVNV | |||||||||||||
10 | 1ohfA1 | 0.13 | 0.12 | 4.08 | 0.64 | PROSPECTOR2 | AVPFNVTRPGIAAGVTLTWASMPPGGSAPSG-----DPAWIPDSTTQFQWRHGGFDAPTGYTIPRGYTMQYFDTTTNEWNGFANPDDVVTFGQTGGAAGTNATITIT-------APTVTLTILATTTSAANVINFRNLDAETTAA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |