Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MNFYQQLVQQKLKTITPEELVSYSRDYNIPLTVEQAKKILHIARTNKINVFDPQERKKWVKELAKITSPQVAKKANELFLKFV |
1 | 5cwcA1 | 0.08 | 0.07 | 2.86 | 0.74 | SPARKS-K | | ------SEKEELRERLVKICVENAKRKGDDTEREAFELVREAAERAGID--SSEVLELAIRLIKECVEREISEACRAAAEAFK |
2 | 2kn2A | 0.12 | 0.12 | 4.22 | 0.74 | FFAS-3D | | EEELKEAFKVFDGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRLRRKFS--- |
3 | 2jnxA | 0.11 | 0.11 | 3.89 | 0.31 | HHpred | | ---FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMD |
4 | 2f2pA1 | 0.13 | 0.12 | 4.20 | 0.82 | MUSTER | | -EEIREAFRVF--YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA-RKEVIRNKIRAIGKMARVFS |
5 | 3ox6A | 0.14 | 0.14 | 4.90 | 0.47 | CNFpred | | REAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNGGHVDFDDFVELMGPKLLAETADMIVKELRDAFREFD |
6 | 1djiB | 0.17 | 0.13 | 4.36 | 0.35 | HHsearch-2 | | ------------NKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ--RA----EIDRAFEEAA |
7 | 2kn2A | 0.14 | 0.13 | 4.55 | 0.76 | Neff-PPAS | | EEELKEAFKVFDKDISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRLRRKFSS-- |
8 | 3a1iA1 | 0.11 | 0.07 | 2.61 | 0.58 | HHsearch | | ----------ATIRPDDKAIDAAARHYGITLDKTARLEWPALIDGA-LGSY------DVVDQLYADEATPPT----------- |
9 | 2f2pA1 | 0.12 | 0.12 | 4.24 | 0.76 | SP3 | | REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAAAARK-EVIRNKIRAIGKMAR |
10 | 2kn2A | 0.14 | 0.13 | 4.55 | 0.47 | PROSPECTOR2 | | GHMAEEELKEAFKVISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRLRRKFS--S |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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