Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TDSIFYQIFLNFPTIFFELINQPNTNTKTYEFTSREVKQLSFRLDGLFLPTDNNPNKPFYLVEVQFQPDDNLYYRLFAELFLFLRQYQPPNPWHIVVIYPSRNIERQQNQHFGNILASNQVQRIYLDELEKTVSGSLGVGVVKLVIEAETQAINLAKSLISQAQEEIIEPKIQEDLINLIQTIIVYKLPQKTRKEIX |
1 | 3s1sA | 0.11 | 0.09 | 3.32 | 0.75 | SPARKS-K | | EVSVYHPICEAALNQALVNTGL----DSTYEVVHHELVGSI-EADFVIKNKQT--KKYLLIVEVKRTKSQVSSTRYRLQAQSYVREANIKVEQHYYCLTN--------------------LEIIDFFKHDPNKPVVSQQIIEPSPIVDTNRLVEAFQNIIDISVNDAGTYSSTANLVDILESWHQALVVAGYEYIR- |
2 | 2ewfA3 | 0.15 | 0.13 | 4.29 | 0.76 | FFAS-3D | | NKNTVFEWLT---WNGFIILGNALEYKNNFVIDEPVTHAAGNQPDMEII-----YEDFIVLGEVQFKMESEPVTRHYLNKKKELEKQGVEKELYCLFIAPEINKNTFEEFMKYNIVQNTRIIPLSLKQFNMEKGRRL----------SSYDIKNLMVSLYRTTIECERKYTQKAGLEETLNNWVVDK-------EV- |
3 | 5gkeA2 | 0.10 | 0.06 | 2.06 | 0.28 | HHpred | | SEAEMAELIFENPEVI----E------PGFKPLFREKAIGTGIVAVLGRDS----DGNIVVLELKRRAELHAVRQLKSYVEILREEY--GDKVRGILVAPSL--TSG----AKRLLEKEGLEFRKLEPPKR------------------------------------------------------------------ |
4 | 3s1sA | 0.13 | 0.12 | 4.21 | 0.66 | MUSTER | | GDSVYHPICEAALNQALVNTGL----DSTYEVVHHELVGS-IEADFVIKNKQT--KKYLLIVEV--RTKSQVSTRYRLQAQSYVREANIKVEQHYYCLT---KHDPNKPVVSQQIIEPS---PIVVGNFSDTVSEEAFQNIIDISVNDAGTYKSSTANLVDILENRKDNTSWHQALVVAGYEYIRGVLRGQNVEVPT |
5 | 5gkeA2 | 0.10 | 0.06 | 2.06 | 0.40 | HHsearch-2 | | SEAEMAELIFENPEVI----E------PGFKPLFREKAIGTGIVAVLGRDS----DGNIVVLELKRRAELHAVRQLKSYVEILREEY--GDKVRGILVAPSL--TSG----AKRLLEKEGLEFRKLEPPKR------------------------------------------------------------------ |
6 | 3s1sA | 0.13 | 0.12 | 4.21 | 0.46 | Neff-PPAS | | GDSVYHPICEAALNQALVNTGL----DSTYEVVHHELVGS-IEADFVIKNKQT--KKYLLIVEV--RTKSQVSTRYRLQAQSYVREANIKVEQHYYCLT---KHDPNKPVVSQQIIEPS---PIVVGNFSDTVSEEAFQNIIDISVNDAGTYKSSTANLVDILENRKDNTSWHQALVVAGYEYIRGVLRGQNVEVPT |
7 | 1vrrA1 | 0.13 | 0.09 | 2.97 | 0.62 | HHsearch | | YSLNGLEYIVHLPHIWEEIQEIIVSIAEACKYSPVALNEKESQTDFVK---------DRVAIEVQFGKYSFVAYDLFVKHMAFYVSDKI---DVGVEILPMKELSKEMISYYEGELY-------NVIRQGRGVPAVP-LVLIGIA--P------------------------------------------------- |
8 | 2qtzA2 | 0.12 | 0.08 | 2.86 | 0.81 | SP3 | | ----------------------------------------SFHL-------PDDPSIPIIMVGP-------PFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRLRHFLKHGILTHLKV--SFSRDAPPAK--------YVQDNIQLHGQQVARILLQENGAKNMAKDVHDALVQIISKE-VGVEKLEAM |
9 | 1jwyb | 0.11 | 0.11 | 3.88 | 0.76 | PROSPECTOR2 | | DQPVINKLQDVFNTVLENIVGRDFLPRPLILQLTHLPIADDGSQTQEWGEFLHKPNDMFINLKIYSPHVVNLITDIEQQIRRMVMAYIKKQNAIIVAVTPANTDLANSDALQLAKEVDPEGKRTIGMEVLTGRVIPLTLGFIGVIKKSIRESLKSEILYFKSIANRSGTAYLSKTLNKLLMFHIRDTLPDLKSKMLS |
10 | 4c7qA | 0.18 | 0.06 | 1.98 | 0.40 | FFAS03 | | TDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVEAQSR---------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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