Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ITNLIAFQIGWFACVLGGANGLPWIGVGVVALVAGLHLSQSRHPRRESALLLTIGLLGAGWDSLLVRLGFLDYPSGMLLPWLAPVWIIAMWIAFATTLNVSLGWLKDRWFLATVLGAVGGPLAYYAGHKLGGVQFPDVFVGMAVLAGGWSFLMPL |
1 | 5jkiA | 0.16 | 0.16 | 5.35 | 1.23 | SPARKS-K | | VSLFLFFLILAAAISKAAVLIRASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPLVSFSFPMNAACVYPVIAYFLVKHLPFLSKHKKMVYIIAGVIAVLVGISRVYLG-VHFVTDVLGGFSLGLLLFFLVKG |
2 | 6i1rA2 | 0.10 | 0.10 | 3.57 | 1.00 | MUSTER | | VVPSVIYLIHNNVQFATLTYYQIMGNLKIVTTGILFRLVLKRKLSNIQWMAIVLLAVGTTTSQV---KGCGDSPCDSLFSAPLEGYLLGILSACLSALAGVYTEYLMKNIVKVYSTSMAMLLTMVLSIYL---VKATIQLFLGIIICIISLQMYF |
3 | 3rkoB | 0.11 | 0.10 | 3.74 | 1.12 | CNFpred | | WLADAMAGPTPVSALIHAA---TMVTAGVYLIARTHGLFLMT--PEVLHLVGIVGAVTLLLAGFAALV-QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMT-HAFFKALLFLASGSVILAC-FKMGGLRSIPLVYLCFLVGGAALSALPL |
4 | 4xu4A | 0.14 | 0.10 | 3.32 | 1.84 | HHsearch-2 | | TARQALGGVAAVVGTYVTTALVHAFTALVCAAAAITWCVL--GDGPGAACGVVIAVIGPAVEIALVQLGVFAYHPDSDGLFGVAPFLAPLYFAFGVVAALLGELAVARRPL-------------------------------------------- |
5 | 4zowA2 | 0.08 | 0.08 | 3.09 | 1.17 | Neff-PPAS | | FVSLPLLAWIAQSPIIIITGELLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLS |
6 | 4xu4A | 0.13 | 0.09 | 3.15 | 1.30 | HHsearch | | TARQALGGVAAVVGTYVTTALVHAVTALVCAAAAITWCVL-GDGP-GAACGVVIAVIGPAVEIALVQLGVFAYHPDSDGLFGVAPFLAPLYFAFGVVAALLGELAVARRPQL------------------------------------------- |
7 | 5wudA | 0.13 | 0.12 | 4.23 | 1.17 | SPARKS-K | | IFNYIGIVAFAISGAIKAVKKMDLLGVLVLGFSTALGGGIIGKTPPTNLPYPITAFLASLATFVFYRIF-----TNVGKP----LLYADAIGLGAFASSGASLAYSVNVILVVIVGAITAVGGGVIRDILSN---EVPLILTATTAVIGSFVYFI |
8 | 4zowA2 | 0.12 | 0.12 | 4.09 | 1.00 | MUSTER | | FVSLPLLAWIAQSPIIIITGGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATV----ISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFAGMLQMLIFTVGIEISKHAWLNGGNGLF---NLFNLVNGILWLSLMVI |
9 | 4he8F | 0.15 | 0.14 | 4.79 | 1.08 | CNFpred | | WLPDAMAGPTPVSALIHAA---TMVTAGVYLIARSSFLYSV--LPDVSYAIAVVGLLTAAYGALSAFG-QTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFT-HAFFKALLFLASGSVIHALGRKMGGLWLPQTRWHALIGALALGGLPLL |
10 | 4q65A2 | 0.13 | 0.13 | 4.48 | 1.05 | Neff-PPAS | | LFWAFAQQGGSSISLYIDRFPTAMFQSINAFAVMLCGVFLAWVVNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGLPLMVLGLAVMGFAELFIDPVAMSQITRTGVLTGIYMLLSGAIANYLAGVIAINAYIEVFDQITWGALACVGVVLM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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