Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | YLSGEIHTDWRERIEAGADEAGLDITFSAPVTDHEASDDCGVAILGQEDKPFWKDHKGAKLNAIRTRTLIEQADVVVVRFGDKYKQWNAAFDAGYAAALGKPLIVLHPQEHTHALKEVDAAALAVAETPEQVVEILRYVI |
1 | 6evsA | 0.18 | 0.16 | 5.13 | 1.35 | SPARKS-K | | YLASPFFNKHVSKAEQVLRDLGH--TVFSP--RENQLPEV------EFGSF-----EWRTFVFKNDLEHIKWADITFGIIGDNYDDTGTAWELGASYILGKPVMLFSPTGEI-INLMITDSLHAYFEDWNDVENYDFATL |
2 | 1s2gB | 0.16 | 0.16 | 5.21 | 1.77 | FFAS-3D | | YLGSPFYSERAAKAKELLAKNPSIAHVFFPFDDGFTDPDEKNPEIGGIRSMVWRDAT-----YQNDLTGISNATCGVFLYDMDQLDDGSAFEIGFMRAMHKPVILVPFTEHPEKNLMIAQGVTTIIDGNTEFEKLADYNF |
3 | 3ehdA | 0.18 | 0.16 | 5.14 | 1.42 | HHpred | | YFAGPLFSQYNAYLVEQIRQLDKTIDLYLPQENAAINDK----------SAYA-D---SK-IALADTENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRDNHLNEIAELNGRVVSSEEDLLEEIKQRL |
4 | 6evsA | 0.17 | 0.16 | 5.14 | 1.66 | MUSTER | | YLASPFFNEEQLKHVSKAEQVDLGHTVFSPRENQLP--------EVEFGS-----FEWRTFVFKNDLEHIKWADITFGIIGDNYDDTGTAWELGASYILGKPVMLFSPTGEIIN-LMITDSLHAYFEDWNDVENYDFATL |
5 | 3ehdA | 0.15 | 0.14 | 4.56 | 1.21 | CNFpred | | YFAGPLFLRYNAYLVEQIRQLDKTIDLYLPQENAAINDK---------SAYADSKMIAL-----ADTENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRFHYLNLYTVGLIRVVSSEEDLLEEIKQRL |
6 | 6evsA | 0.19 | 0.16 | 5.31 | 1.51 | HHsearch-2 | | YLASPFFNEEQSKAEQVLR--DLGHTVFSPRENQLPEV--------EFGSFEWRTFVFKN-----DLEHIKWADITFGIIGDNYDDTGTAWELGASYILGKPVMLFSPTG--EIINLITDSLHAYFEDWNDVENYDFATL |
7 | 1s2gB | 0.13 | 0.13 | 4.44 | 1.62 | Neff-PPAS | | YLGSPFYRERAAKAKELLAKNPSIAHVFFPFDDGFTDPDE-----KNPEIGGIRSMVWRDATYQNDLTGISNATCGVFLYDMDQLDDGSAFEIGFMRAMHKPVILVPPEKEKKMNLMIAQGVTTIIDGNTEFEKLADYNF |
8 | 6evsA | 0.19 | 0.16 | 5.31 | 2.03 | HHsearch | | YLASPFFNEEQSKAEQVLR--DLGHTVFSPRENQLPEV--------EFGSFEWRTFVFKN-----DLEHIKWADITFGIIGDNYDDTGTAWELGASYILGKPVMLFSPTG--EIINLITDSLHAYFEDWNDVENYDFAT- |
9 | 3ehdA | 0.15 | 0.14 | 4.56 | 1.27 | PROSPECTOR2 | | YFAGPLFSQADLYLVEQIRQLDKTIDLYLPQENAAINDKSAYA---------------DSKIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGTVGLIKLNGRVVSSEEDLLEEIKQRL |
10 | 1s2gB | 0.20 | 0.17 | 5.50 | 1.19 | SAM | | YLGSPFYSDAQRERAAKAKEAKNPSHVFFPFDDGFTG---------GIRSMVWRDATYQN-----DLTGISNATCGVFLYDMDQLDDGSAFEIGFMRAMHKPVILVPFTEHPKKMNLIAQGVTTIIDGNTEFEKLA---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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