>PF11066 (145 residues) AKGSYFADSFSCEVPNKGQTALDVYLEIAKQTPAWISFLMAMRNRIVSMFGLKHLGRLQD ATMDIEPDHLKVGDRLGIFTLVSNTDDEIVLEDRDKHLDVRVSFLLDPQREKVTVHATTV VHVHNRWGKAYMLFVAPVHKIIVPS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | AKGSYFADSFSCEVPNKGQTALDVYLEIAKQTPAWISFLMAMRNRIVSMFGLKHLGRLQDATMDIEPDHLKVGDRLGIFTLVSNTDDEIVLEDRDKHLDVRVSFLLDPQREKVTVHATTVVHVHNRWGKAYMLFVAPVHKIIVPS | |||||||||||||||||||
1 | 4igvA | 0.10 | 0.09 | 3.30 | 1.10 | SPARKS-K | --DLSGKMVKQVEI---LSDGIVFYEIFRYRLYLISEMS---------PVNIQGVDLLEG---NWGTVGSVIFFKYTIDIVEAIDEKSVTFKIVEGDLTFIIIVQVDTKGEHNSVTWTFHYEKLVEEPNTLMNFCIEITKDIETY | |||||||||||||
2 | 3ijtB | 0.12 | 0.10 | 3.68 | 1.15 | MUSTER | MGRGSMKFSFELAVNTKKEDAWTYYS--VNQWFVWEGDLEQIS-------------EGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPGTISLRHSVSLTD--SDTTEEALAFLKQIFADVPE | |||||||||||||
3 | 3ijtB | 0.13 | 0.12 | 4.07 | 1.32 | Neff-PPAS | MGRGSMKFSFELAVNTKKEDAWTYYSQ-VNQWFVWEGDLEQISL------------EGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDG-TISLRHSVSLTDSDTTEEALAFLKQIFADVPE | |||||||||||||
4 | 4rehA | 0.12 | 0.10 | 3.68 | 1.06 | SPARKS-K | --GLTGKLICQTGIK---SDGDVFHELFGTR-----------PHHVPNITP-ANIQGCDLHEGEFGKVGSVVIWNYSIEEIVAIDEKSVTFKVVEGHLSIVFSVHVDTKGEDNLVTWSIDYEKLNKDPTSYLDFLLSVTRDIEAH | |||||||||||||
5 | 4rehA | 0.09 | 0.08 | 2.94 | 0.67 | FFAS-3D | --------ICQTGIKSDGDVFHELFGTRPHHVPNIT-------PANIQGCDLHEGEFGKVGSVVIWNYSIDGNAMIAKEEIVAIDEEDKSVTFKVEFKSIVFSVHVDTKGEDNLVTWSIDYEKLNEYLDFLLSVTRDIEAHHLP- | |||||||||||||
6 | 2pcsA | 0.12 | 0.10 | 3.66 | 0.39 | HHpred | ------NGNGSIELK---GTVEEVWSKLMSILSKCIMG-------CKSLELIG-EDKYKAD--LQIGIAAVKGKYDAIIEVTDIKPYHYKLLVNGEFVNAEGVIDLTPINDCTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISD | |||||||||||||
7 | 2ns9A | 0.15 | 0.13 | 4.44 | 1.00 | MUSTER | VWGLKVRYEGSFEV---SKTPEEVFEFLTD--PKRFSRAFP---------GFKSVEVEDGSFTIELRLSLGPGDARVRASFEDLEKPKGSGRGAGSTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMIND | |||||||||||||
8 | 2luzA | 0.09 | 0.07 | 2.63 | 0.79 | CNFpred | --GEARSIIIRQRYD---APVDEVWSACTDPINRWFIEP---------------------------KGDLREGGNFASGDILRCEPRRLTISWVY-KPDSEVELRLSEEGDGTLLELEHATTSLVEVGVGWEMALDFLGMFIRGD | |||||||||||||
9 | 2ns9A | 0.13 | 0.12 | 4.06 | 0.89 | HHsearch-2 | VWGLKVRYEGSFEVS---KTPEEVFEFLTKRFSRAFPGFKS-----VEVED----GSFTI----ELRLSLGLRDARVRASFEDLEKPSATVKGSGRTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMIND | |||||||||||||
10 | 2ns9A | 0.09 | 0.08 | 3.16 | 1.11 | Neff-PPAS | VWGLKVRYEGSFEVSKTPEEVFEFLTD-----------PKRFSRAFPGFKSVEVEDGSFTIELRLSLGPLRGDARVRASFEDLEKPSKATVKGSGRTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMIND | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |