Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | YRCEGKIISVGDTSGELLAKCGEPDWKQSHTEEIVKTLDEDNKRKIIIDVEEWTYNLGPRRFMRIFKLKNGKVVDIR |
1 | 3gmvX2 | 0.15 | 0.14 | 4.79 | 1.91 | SPARKS-K | | KLSHYNRTALGMTEAQLWAAVP----KDSCVSQGESYPNWPAKTGFEEKYYCAA-ATGLFPPSASFHLTDGVLTYRY |
2 | 3c7uB2 | 0.13 | 0.13 | 4.49 | 1.72 | MUSTER | | PS-APTLVTVGMTRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSSTGFYRGSAHLAFTDGVLQGKR |
3 | 3d4eA | 0.16 | 0.12 | 3.90 | 1.33 | CNFpred | | ------ELKIGESYKKIVEKLGEPDVLSQSMSS-------------DKEEMQTVWSSG-SSATIELYFENGLLKNKT |
4 | 5wamA | 0.19 | 0.14 | 4.62 | 1.00 | HHsearch-2 | | IIQGNAALRPGMTKDQVLLLLGSPILRDAFHT------------------DRWDYTFNTERSNLTVYFENGVLVRTE |
5 | 3c7uB2 | 0.14 | 0.12 | 4.01 | 1.54 | Neff-PPAS | | -------VTVGMTRAQVLATVGQGSCTTWSEYY----PAYPSTAGVTLSLSCFDVDGYSSRGSAHLAFTDGVLQGKR |
6 | 5wamA | 0.19 | 0.14 | 4.61 | 1.58 | HHsearch | | SLFPVAALRPGMTKDQVLLLLGSPILRDAFHT------------------DRWDYTFNTERSNLTVYFENGVLVRT- |
7 | 3c7uB2 | 0.14 | 0.13 | 4.45 | 1.88 | SPARKS-K | | TLAKFNQVTVGMTRAQVLATVGQGSCTTWSEYY----PAYPSTAGVTLSLSCFDGYSGFYRGSAHLAFTDGVLQGKR |
8 | 3gmvX2 | 0.15 | 0.14 | 4.78 | 1.57 | MUSTER | | -KAKTPSVKLGMTEAQLWAAVP----KDSCVSQGESYPNWPAKTGFEEKYYCAA-ATGLFPPSASFHLTDGVLTYRY |
9 | 3c7vB | 0.14 | 0.12 | 3.97 | 1.17 | CNFpred | | ------QVTVGMTRAQVLATVGQGSCTTWSEYYPAYPST-------AGVTLSLSCFDV-YRGSAHLWFTDGVLQGKR |
10 | 3gmvX2 | 0.14 | 0.12 | 4.00 | 1.49 | Neff-PPAS | | -------TALGMTEAQLWAAVPKDSCVSQGESY----PNWPAKTGFEEKYYCAA-ATGLFPPSASFHLTDGVLTYRY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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