Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MGEAKRRKSSLGENYGQEERILPWVPITKSQSEQFVQLTTRGAWYGISAMVIIWVTVRFIGPAFGWW |
1 | 4yxxA3 | 0.11 | 0.09 | 3.27 | 0.91 | SPARKS-K | | VEEAVKRALKLKTKLG----------VSLEQALKILEVAAKLVEEAVKRALKLKTKLGVSLEQALKI |
2 | 2q7mC | 0.07 | 0.06 | 2.49 | 0.48 | FFAS-3D | | -EHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGAAFAGLMYLFVRQK------- |
3 | 2pffB | 0.26 | 0.15 | 4.61 | 0.39 | HHpred | | -------EDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAG--------------------- |
4 | 5u1sA1 | 0.16 | 0.16 | 5.43 | 0.80 | MUSTER | | EETTEVQRAIKSEYCNMSENRLLWSCISVDDLNVILENATNFISATLKCLVCLWSTIRLEGLPKNKD |
5 | 4dwrA | 0.08 | 0.07 | 2.93 | 0.57 | CNFpred | | ERAIRKYRIPWPDR------ELVSVPFQSEEGQRYFSAMAAANFAWANRQMITHWVRESFQEVFKQD |
6 | 2pffB | 0.16 | 0.15 | 4.94 | 0.57 | HHsearch-2 | | TSLPPSILEDLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHL------PAGKQVEISLVNGAKNLV |
7 | 4f4cA1 | 0.05 | 0.04 | 2.15 | 0.78 | Neff-PPAS | | FINEQIVINNNGSTFLPTGQNYT----KTDFEHDVMNVVWSYAAMTSVLYLLNTCAYRMGLALIITD |
8 | 1qleD | 0.17 | 0.10 | 3.42 | 0.27 | HHsearch | | ------------TDHKHGEMD-----I-RHQQAGFIKGATWVSILSIAVLVFLALANS--------- |
9 | 1q90R | 0.10 | 0.06 | 2.19 | 1.06 | SP3 | | -----------------SSEVPD------MNKRNIMNLILAGGAGLPITTLALGYGAFFVPP----- |
10 | 4nsmA | 0.08 | 0.07 | 2.94 | 0.40 | PROSPECTOR2 | | QKRAQIQKDGTSRLENKQFPYPGSTGLDDTYMNSLIQYLQERK-----QIEDKWRASLLKGIQDHVL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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