>PF10995 (510 residues) MDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGD PGKVIKLDESHGPEKIRLFTMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITS ESLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSLLMGEYRSLFGLASLRFQGDQHLFD IAFWCNEKGVSARQQLLLCQQDERWMLSHQEEAEIQPRSDEKRILSHVAVLEGAPPLSEH WALFDNNEALFNEARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIAS LRATDERLLLGCGANMIIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLR GFQPWDTFCDAVHTMMSNTLLPADGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGG NRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPELWGT PLPLAKRADPVINAEHDGRIWRRIPEPLRL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MDPVFSLGISSLWDELRHMPTGGVWWVNADRQQDAISLVNQTIASQTENANVAVIGMEGDPGKVIKLDESHGPEKIRLFTMPDSEKGLYSLPHDLLCSVNPTHYFFILICANNTWRNITSESLHKWLEKMNKWTRFHHCSLLVINPCNNSDKQSSLLMGEYRSLFGLASLRFQGDQHLFDIAFWCNEKGVSARQQLLLCQQDERWMLSHQEEAEIQPRSDEKRILSHVAVLEGAPPLSEHWALFDNNEALFNEARTAQAATIIFSLTQNNQIEPLARRIHTLRRQRGSALKIVVRENIASLRATDERLLLGCGANMIIPWNAPLSRCLTLIESVQGQQFSRYVPEDITTLLSMTQPLKLRGFQPWDTFCDAVHTMMSNTLLPADGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMVWFEDKQISAELVQMRLLSPELWGTPLPLAKRADPVINAEHDGRIWRRIPEPLRL | |||||||||||||||||||
1 | 3dvlA | 0.11 | 0.08 | 2.99 | 1.03 | FFAS-3D | ----MRTMIEGFDDISGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGEFDEPGVFVTFEETPQDIIKNARSFGEGKLFILDASVGGFDLSALIERINYAIQKRARRVSIDSVTSVFQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGDEMCGGGFFKDSIILATTGKTLLVSRFVENKERAILFAYEESR--AQLLRNAYSFEEMERQNLLKIVCAYPESAGLEDHLQII-----------------KSEINDFKPAR---IAIDSLSALARGVSNNAFR-----QFVIGVTGYAKQEEI-------TGLFTNTSDQFMGAH--SITDSHIITDIILLQYVEIAINVFKMR------------------------------------------------------------------------------- | |||||||||||||
2 | 4ijmA | 0.10 | 0.08 | 3.02 | 1.39 | CNFpred | AIAKMRTMIEGFDDISHGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIDEPGVFVTFEETPQDIIKNARSFGEGKLFILDASP-GFDLSALIERINYAIQYRARRVSIDSVTSVFQQYASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLRRRTLEILKLR--GTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSN-------------------VRVSSGVVRLDEMCG-FKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEERAQLL-MDFEEMERQNLLKIVCA-GLEDHLQIIKSEINDFKPARIAIDSLSALARGV---------SNNAFRQFVIGVTGYAKQ---EEITGLFTNTSDQFMGVHSITDSHISMITDTIILLQYSRAINVFKMRGSWHDKAIREF-------------------------------------------------------------------- | |||||||||||||
3 | 3dvlA2 | 0.08 | 0.03 | 1.32 | 1.01 | HHpred | SNVRVSSGVVRLDEMCGGFFKDSIILATGATGTGKTLLVSRFVENACAKERAILFAYEESRAQLLRNAYSERQNLLKIVCAYPESAGLEDHLQIIKSEINFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMSITDS--HII--TDTIILLQYVEGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNRIISG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2ztsC | 0.10 | 0.04 | 1.50 | 1.10 | HHsearch | PVRRVKSGIPGFDELIGGFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEGEPGVFVTLEERARDLRREA-SFGEGKIAIVDGVSPSFNVDNFLRYIYRVVKANAKRLVIDSIPSIALREEERKIREVLLKLNTILLE-GVTTILTTEAPGKLS---RYGIEEFIARGVIVLDLQEKKRYVLIRK-RETRH--SK-KYPFEIGPNGIVVYP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 3jzmA | 0.11 | 0.09 | 3.13 | 1.36 | CNFpred | AIAKMRTMIEGFDDISHGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIDEPGVFVTFEETPQDIIKNARSFGEGKLFILDAS-GGFDLSALIERINYAIQYRARRVSIDSVTSVFQQYASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLRRRTLEILKLR--GTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVR----------------LDEMCGGGFFKDSIILATGAT-GTGKTLLVSRFVENACANKERAILFAYEERAQLL-MDFEEMERQNLLKIVCA-GLEDHLQIIKSEINDFKPARIAIDSLSALARGV---------SNNAFRQFVIGVTGYAKQ---EEITGLFTNTSDQFMGAHSITDSHIMAITDTIILLQYSRAINVFKMRGSWHDKAIREFM------------------------------------------------------------------- | |||||||||||||
6 | 4ydsA | 0.10 | 0.04 | 1.47 | 1.02 | HHsearch | --MIISTGNDDLDRRLGGIPYPASIMIEGDHGTGKSVLSAQFVLGFLSDKKGYVITTEQTTKDYLIKMKEIIRGKLRIAPLNTKSSLAEKILDVIVNFIRKNIDFIVIDSLSILAAFSKEKQLLQFMKDIRVLVN-TGKMILFTIHPDTFDE--EMKSKITSIVDVYLKLSAATGRRVKILERVKTTGGISGSDTISFDVDPLGIKVVPLSLS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3s1aA | 0.11 | 0.08 | 3.08 | 1.35 | CNFpred | AIAKMRTMIEGFDDISHGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIDEPGVFVTFEETPQDIIKNARSFGEGKLFILDASP-GFDLSALIERINYAIQYRARRVSIDSVTSVFQQYASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLRRRTLEILKLRG--TSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVR----------------LDEMCGGGFFKDSIILATGAT-GTGKTLLVSRFVENACANKERAILFAYEERAQLLRNAFEEMERQNLLKIVCA-GLEDHLQIIKSEINDFKPARIAIDSLSALARGV---------SNNAFRQFVIGVTGYAKQ---EEITGLFTNTSDQFMGAHSITDSHIEEITDTIILLQYSRAINVFKMRGSWHDKAIREF-------------------------------------------------------------------- | |||||||||||||
8 | 3dvlA2 | 0.09 | 0.04 | 1.51 | 1.02 | HHsearch | SNVRVSSGVVRLDEMCGGFFKDSIILATGATGTGKTLLVSRFVENACAKERAILFAYEESRAQLLRNAYSERQNLLKIVCAYPESAGLEDHLQIIKSEINFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMSIDSH---II--TDTIILLQYVEGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNRIISGDEKS---ELSRIVRGVQKGPES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 1tf7A | 0.10 | 0.08 | 3.02 | 1.33 | CNFpred | AIAKMRTMIEGFDDISHGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIDEPGVFVTFEETPQDIIKNARSFGEGKLFILDAS-GGFDLSALIERINYAIQYRARRVSIDSVTSVFQQDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLRRRTLEILKLR--GTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSN-------------------VRVSSGVVRLDEMCG-FKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEERAQLL-MDFEEMERQNLLKIVCA-GLEDHLQIIKSEINDFKPARIAIDSLSALARGV---------SNNAFRQFVIGVTGYAKQ---EEITGLFTNTSDFMGAHSITDSHISTITDTIILLQYMSRAINVFKMRGSWHDKAIREFM------------------------------------------------------------------- | |||||||||||||
10 | 2dr3D | 0.07 | 0.03 | 1.27 | 1.02 | HHsearch | -TRRVKTGIPGVDEILGGIPERNVVLLSGGPGTGKTIFSQQFLWNGLMGEPGIYVALEEHPVQVRQNMAQWDKGMFAMVDAFTALTDIREFIEVLRQAIRINAKRVVVDSVTTLYINK-PAMARSIILQLKRVLAGTGCTSIFVSQVSVGERGFGGPG-VEHGVDGIIRLDLDEGELKRSLIVWKMRGTSHSMRRHPFDITDKGIIVYPDKVLKRGK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |