Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ILALIIAVVIVVVATVLVQNWWNNRPGPEPEEVTVTASVGDESIEVSPYLVCEPGVECPEGEVPNLPVGPDETLKLELPEPIHNHDWQLLMIYDDPAANNQQLHGPHDTTEVEIPGSVDPVGDSTERPRLVVVEVSSVMIGHDDEGVETPYTTIWSLST |
1 | 6h9cD | 0.14 | 0.13 | 4.32 | 0.65 | SPARKS-K | | NIGNLSAEKQISLYDGQPFISEQDVAAGDPNTPALTIEGPDYVIAVDAGTPIAPEFRDSNGE----KLDPSTRVIVQKCDRQGNPLGIIFNDTTDPKTAKSLMVDEREIVKVFVDVPDGANGYDAERSRF--------TLGDDTSDFGKAVEIVDHDDL |
2 | 2e56A | 0.16 | 0.11 | 3.78 | 0.52 | FFAS-3D | | ----------------------------EAQKQYWVCNSSDASIS---YTYCD-----KMQYPISINVNPGSKGLLHIRRDLKQLYFNLYITVNTMNLPKRKEALKGETVNTTISFSFKGIKFSKGKYKCVVEAIS-------GSPEEMLFCLEFVIL- |
3 | 5acfA | 0.15 | 0.11 | 3.60 | 0.32 | HHpred | | -----------------------------------GVWVNGVDQGNNPVK--NLTSTCNVDVPKSVPVNAGDTLTFEWYHNSSHGPIAVYIAPANGQGNVEDLITAHGQHSVVVP-HV------APGDYLFRAEIIALHEADPIRGAQFYISAQITI-- |
4 | 5ny0A2 | 0.10 | 0.09 | 3.46 | 0.69 | MUSTER | | NIA---ANIALENSATKIDIWMIADIGIHPHTTALTI--NNATLTMENGNNSALNIKLDGDTSNSFTVGEGSTVKLSAK------VDNVRILPYEDSNTANVSFAKGSDVTLHAGTGSNLRMGASISNQIDF---GKATFIKDSEFDYYWNDQQKTGST |
5 | 2pn5A | 0.08 | 0.07 | 2.72 | 0.87 | CNFpred | | SFPSTQDTFVGLKALTKMAEKISP-----RNDYTVQLKYKKSAKYFKINSE-----QIDVENFVDIPED-TKKLEINVGG-IGFGLLEVVYQFNLNLVNFENRF----QLDLEKQNT--------GSDYELRLKVCASYIPQLTDRRSNMALIEVTLPS |
6 | 4nw4A | 0.17 | 0.16 | 5.18 | 0.42 | HHsearch-2 | | FVRILISRTQNYQAVVDLTEFTYKRLGKDKLGNDVEVYV-----EHIPYHGKKLAF--TNG-REALTNQTGK-IVTNKDKILGTTLWNGTKVVD-KNGNDLAKFDPNSKYEFFNLQTGETRGDVGTNRYGAALELTELTRGKDNAGNDIPYQGTYHPAF |
7 | 3cvzA2 | 0.06 | 0.05 | 2.25 | 0.70 | Neff-PPAS | | ---------IITNQADAEAIVTKLNSLNEK---TLIDIATKD----TFGMVSKTQDSEGKNVAATKALKVKDVATFGLKSGGSEDTGYVVEMKAGAV-EDKYGKVGDSTAGIAINLPSTGLEYAGKGTTIDFNKTLKVDVTGGSTPSAVAVSGFVTKDD |
8 | 2vtcA | 0.12 | 0.11 | 3.79 | 0.65 | HHsearch | | ----HGQVQNFTINGQYNQGFILDYYGHFPNVAGWYAEDLD----LGFISPDQYTTVCHKNGAISATAAAGSNIVFQWGVWPNNLRWVKIQEANYNTQVWQDLINQGNKWTVKIPSSL------RPGNYVFRHELLAAHGASSANGMQNYPQVNIAVT- |
9 | 3n6rA | 0.07 | 0.06 | 2.55 | 0.68 | SP3 | | RVAAAAAAMHRVAEIRRTRVSGRMDNHERRVGTEWVVTLQGADFPV--TIA-------ADHDGSTVSFDDGSSMRVTSD--------------WTPGDQLANLMVDGAPLVLKVGKISGGIRTRGADLKVHVRTPRQAELARLMPEKLPPDTSK-MLLC |
10 | 3n6rA2 | 0.09 | 0.08 | 3.13 | 0.62 | PROSPECTOR2 | | VETDLRRVAAAAAAMHRVAEIRRTRVSGRRVGTEWVVTLQGADFPVTIAA---------DHDGSTVSFDDGSSMRVTSDWTPGDQLANLLVLKVGKISGGFRIRTRGADLKVHVRLMPEKLPPDTSKQALCTIEVAKINA---SAGNSLAVDDVIMEFE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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