Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | KMWISFAGMGLMIVSILSIYLSRYKFHNRFLKGITALFAYLCMIVGGLIVAYVVLSGP |
1 | 3dl8C | 0.09 | 0.05 | 2.00 | 1.20 | SPARKS-K | | --------------KATISVIIFSLAIGVYLWILDLTFTKIISFILSLR--------- |
2 | 2xndJ | 0.14 | 0.14 | 4.71 | 1.16 | Neff-PPAS | | GVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF- |
3 | 1mztA | 0.08 | 0.05 | 2.07 | 1.17 | SPARKS-K | | ---------------AKAAFDSLQASATEYIGYAWAMVVVIVGATIGIKLFKKF---- |
4 | 4xydA1 | 0.13 | 0.12 | 4.17 | 0.59 | FFAS-3D | | ---SLIVWLLLGFMGAAYFVIPEE-SEREIHSPLLAYLQLAIMVLGTLGVVVTYLFN- |
5 | 3qnqA1 | 0.20 | 0.16 | 4.98 | 0.27 | HHpred | | --SATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQV---------- |
6 | 3rkoL1 | 0.14 | 0.14 | 4.71 | 0.85 | MUSTER | | -MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGE |
7 | 5ldwM | 0.14 | 0.14 | 4.72 | 0.75 | CNFpred | | KSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSR |
8 | 5an8A | 0.16 | 0.16 | 5.14 | 0.46 | HHsearch-2 | | EWYLPLLVSSLVLGWLNLLYYTRGQHTRDLLRF---LLVYLVFLFGFAVALVSLSREP |
9 | 5dn6J | 0.12 | 0.12 | 4.26 | 1.02 | Neff-PPAS | | GMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLLLFA |
10 | 3qnqA1 | 0.19 | 0.19 | 6.10 | 0.54 | HHsearch | | LGSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMGVIPG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|