Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MFETNYWPFPDQAPNPFNAQVEQLSATENVYIFLTTLFGILQLVYVIFKLLCTMFPALHWSPIWRGLENFWLFLSLASLAIAYWWLPSMTFTGYWALTIIATILGLIMLIMMSVKFVSFVKLFYRTGSFAIAIRGPIVLVALDVTIKLHCTPFAILVKEVGNIFYLSEYCNKPLTAAQVAALRICVGGQWFAYTRSTTTSAAKVAAANSTAKYHLFVLQGVAEYTQLSSVKFE |
1 | 3phfA2 | 0.11 | 0.10 | 3.74 | 0.62 | SPARKS-K | | ELGHLTTEKQEYALRLATVGYPKAGVYSGATSVLLSAYNMRETLFIGSHVVLRELRLNVTTQGPNLALYQLLSTALCSALEIGEVLRGLALTRDKLLSMAAVDGFLGRLSLEDAWHLPAYKCVDRLDKVLMIIPLIVTFIISSDR-EVRGALYEASTTYLSSLSPVIMNCTRTQKSCIFALLSYDEKEETTTYI-TSQEVQNSILSSNLHVHYLLLTTNGVMEIAG------- |
2 | 4hkrA | 0.20 | 0.09 | 3.02 | 0.71 | FFAS-3D | | -----------------QLSRAKLKASSKTSALLSIAFAICTTLLVAVHMLALMISTCILPNLHWYIETAWAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIHFYRS----------------------------------------------------------------------------------------------------------- |
3 | 5mg3D | 0.16 | 0.07 | 2.29 | 0.29 | HHpred | | ------------LIAPIQI-----VEERTIGPTLGLEACLAGLL-VSILFMIIFYKK------FGLIATSALIANLILIVGIMSLLPGATLS-------MPGIAGIVLTLAVAVDINERIKEELSNGRTQQAI---------------------------------------------------------------------------------------------------- |
4 | 6eznF | 0.12 | 0.11 | 3.93 | 0.62 | MUSTER | | QISTAKFKVIMQ-PVSWPAFFFDTH----FLIWLFPAGVFLLFLEHVFVIAYSVLCSYFAGVMVRLMLTLTPVICVSAAVALSKIFDIYLDFKALLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQTKLALIAYY--LRMN-SD-SKVAWDYGYIGGMADR-NNTWNNTHIAIVG-------KAMA-SPEEKSYEILKEHD-VDYVLVIFGGLIGFGGDDINKFL |
5 | 3rkoB | 0.07 | 0.03 | 1.09 | 0.67 | CNFpred | | -----------------------------LIARTHGLFLMTEVLHLVGIVGAVTLLLAGFAALQTDIKRVLAYSTMSQIGYMFLALG----VQAWDAAIFHLMTHAFFKALLFLASGSVILACHH------------------------------------------------------------------------------------------------------------ |
6 | 2pffB | 0.23 | 0.21 | 6.73 | 0.67 | HHsearch-2 | | MAKR---PF-DKKSNSALFRAVGEGNAQLVAIFFEELRDLYQTYVLVGDLIK--FSAETLSELIRTTDAEKVF--TQGLNILEWLEPSNTPDKDYLLSIPIPLIGVIQL----AHYVVTAKLLGFTPYLATGHSQGLVAVAIAET--DSWESFFVVRKAITVLFFIGVRCYEAYTSLSILENNEGVPSPMLSISNLT-QEQVQVNKTNSHKQVEISLVNGAKNLVNLTLLKFS |
7 | 3vvnA2 | 0.12 | 0.11 | 3.78 | 0.67 | Neff-PPAS | | -------------------SREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTSAWRITMLGIVPILGMAAATTSVTLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDLISALRTL--------PVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIF-VHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKT |
8 | 1qleD | 0.19 | 0.03 | 0.97 | 0.30 | HHsearch | | --------------------------------------------------------TDH-------------------------KHGQATFAGFIKGATWVSILSIAVLVFLALANS-------------------------------------------------------------------------------------------------------------------- |
9 | 1xl6A | 0.13 | 0.12 | 4.16 | 0.74 | SP3 | | ITRLGLEKRGWLD-DHYHDLL-----TVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGY---GKLIPIGPLANTLVTLEALCGMLGLAVAASLIYARFFDFEGMMRLANLRIEQIIEADVHLVLVRS---EISQE-GMVFRR--FHDLTLTRSRSPIFS----LSWTVMHPHSGETDETLRNSHAFAHAYSCIIWGALDLGKFHEIAQH |
10 | 5cwqA | 0.11 | 0.10 | 3.69 | 0.78 | PROSPECTOR2 | | EELERESEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACERGNS---EEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVAASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEAR------------------KVKESAEEQGDSEVKRLAEEAEQLAREARRHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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