Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | QPMIRFLGKRTVPQKVDHTPHAHPASPTHSLPESFANYRQKAQQHGPLNPQQRTQYSTGRGAVGSHSGKSLGPVEPAKGEFFDRSELPERFRRLKWTMAEIEAVESGGA |
1 | 5c2vC1 | 0.13 | 0.12 | 4.16 | 0.94 | SPARKS-K | | GATWEPLGREEPLTVKHSPF-------KSELVRYGQFQFNDASCHYERGQTTGLIWDLGDEGWGSWKNTKYIRGGRYLPPFRHGRDPGFVFRSENFSPMRLEALICYIR |
2 | 3ifqC | 0.15 | 0.12 | 4.03 | 0.45 | FFAS-3D | | ---------RNDVAPTLMSVPQYRPRPAN--PDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEGGEAASLSLNSDQDYDY--LNEWGNRF-------KKLADMYGGG- |
3 | 3itcA2 | 0.11 | 0.09 | 3.31 | 0.31 | HHpred | | ---LDTSTAPV---IFSHSSSDHPRNIPKFVVSTVADHLDHMREAGVDH-----------LGIGGDYDGTPF-TPDGLGDVSGYPNLIAELLDRGWSQSDLAKLTWKNA |
4 | 6b3nA | 0.14 | 0.12 | 4.10 | 0.85 | MUSTER | | MPV--DLTPYILPGVSF---------LSDIPQETLSEIRNQTIRGEAQIRLGELMVSIRPMQVNGYFMGSLNQDGLSNDNIQIGLQYIEHIERTSLTSREVTVLREI-- |
5 | 1itqA | 0.22 | 0.06 | 1.73 | 0.59 | CNFpred | | ----------------------------------------------------------------------------------KYPDLIAELLRRNWTEAEVKGALADNL |
6 | 2f9jP | 0.19 | 0.06 | 1.78 | 0.41 | HHsearch-2 | | -----------------------------------------------------------------------------EQLQAWRWEREIDERNRPLSDEELDAMFPEGY |
7 | 2n5dA | 0.16 | 0.11 | 3.67 | 0.89 | Neff-PPAS | | ------------PGSYTGAGEPS--------QADLDALLSAVRDNRLSIEQAVTLLTPRRGGGSGGGS-------------MDAKEILTRFKDGGLDRAAAQALLAGRT |
8 | 2f9jP | 0.19 | 0.06 | 1.77 | 0.36 | HHsearch | | -----------------------------------------------------------------------------EQLQAWRWEREIDERNRPLSDEELDAMFPEG- |
9 | 1kn7A | 0.08 | 0.06 | 2.17 | 0.91 | SP3 | | ---------MEVAMVSAESSGCNSHMPYGYAAQARARERERLAHSRAAAAAAVAAATAAVEGTGGSGGGPHHHHQTRGAYSSHD------------------------- |
10 | 1h31b | 0.13 | 0.11 | 3.83 | 0.58 | PROSPECTOR2 | | AEVVAIDGQGHVARPLTDAPGDHEVTEMADAQFPIRGILVNSKNVFPETVMPAYYRVEGFNRPGIAFTSKPIEGEIR----------------PLMTAGQIEDVMTLTQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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