>PF10933 (354 residues) FDSHEAQTPWEAGRHQVPWHLRDMLAQGQRHDVFLIDLSYDPNKQVSQEYGSLDGVQIRS FDQGLGLPFDIWITIGFPLSQAQVDKVQLTGAKIAAFVHESVKRQQEDAFLFPKAPQRVF APPRHLDAVLVADFLSDMSSYLEVLTFVRPQPLPLPYGTRFFQVLAGMLPARKHYAQRPS KNVTIFEPNTHVDRCFVLPLSALERLYRSTNDSLDHVTVTNADTFSALPEVTNYLSKAIS LHPHRMRTSGRFKLPWFLSQFTDVVLSHQWGNPMNYLYFDTMHAGYPLVHNSPHLKDCGL YYEEHDAYTAAQHVHAAFNLSTHDIRALHAGYRRCIWRNHIHNPDVVRAWEARL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FDSHEAQTPWEAGRHQVPWHLRDMLAQGQRHDVFLIDLSYDPNKQVSQEYGSLDGVQIRSFDQGLGLPFDIWITIGFPLSQAQVDKVQLTGAKIAAFVHESVKRQQEDAFLFPKAPQRVFAPPRHLDAVLVADFLSDMSSYLEVLTFVRPQPLPLPYGTRFFQVLAGMLPARKHYAQRPSKNVTIFEPNTHVDRCFVLPLSALERLYRSTNDSLDHVTVTNADTFSALPEVTNYLSKAISLHPHRMRTSGRFKLPWFLSQFTDVVLSHQWGNPMNYLYFDTMHAGYPLVHNSPHLKDCGLYYEEHDAYTAAQHVHAAFNLSTHDIRALHAGYRRCIWRNHIHNPDVVRAWEARL | |||||||||||||||||||
1 | 6d9tA | 0.12 | 0.11 | 3.81 | 1.25 | SPARKS-K | MKIGITCYPSMGGSGIIATELGIKLAERGH-EVHFITSNIPFRIRKP-----LPNMIFHQVEVNQYADLDLLHMHYAVPHAICGILAREMSIKIMTTLHG------TDITVLGYDHSLQGAIKEKSDIVTSVS--KSLAQETHEIIETEIIPIYNFVRE-------NEFPTKHNTALAPDEKVLIHVSNFRQVKRIDTIIETFAKVREKIP---SKLILLGDG--PELVPMRQLTKELVE---EDVLFLGQDCVSEFYQ-LSDLVLLLSEKESFGLTLLEAMKTGVVPISNAGGIGETGFVVDVGDCDSASDYAIRLLED-KVLYNKLQKNMLADIAERFG-SELITDQYEYYY | |||||||||||||
2 | 2gekA | 0.13 | 0.12 | 4.20 | 1.13 | MUSTER | VCPYSFDV--PGGVQSHVLQLAEVLRDAGH-EVSVLAPASPHVKLPDYVVSGGKAVFGPATHRKVKGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVF----QGILRPYHEKIIGRIAV---DLARRWQMEALGSDAVEIPNGVDVASFADA-----PLLDGYPREGRTVLFL--RYDERKGMAVLLAALPKLVARFPDV--EILIVGRG---DEDELREQAGDL----AGHLRFLGQATKASAMRS--DVYCAHLGGESFGIVLVEAMAAGTAVVAFRRVLADAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVHRYDWSVAQIMRVYETVS | |||||||||||||
3 | 3mboA | 0.13 | 0.11 | 3.90 | 1.53 | CNFpred | ------------GSGVVGTELGKQLAER-GHEIHFITSGLPF-----------PNIYFHEVTVN-RENLDILHVHYAIPHAICAYLAKQERIKIVTTLHGTDITVLGIRFGIE-----------QSDVVTAVSH--SLINETHELV-KDIQTVYNFIDEVYFKRDMTQLKKEYGISE--SEKILIHISNFRKVKRVQDVVQAFAKIVTEV---DAKLLLVGDG--PEFCTILQLVKNLH--IEDRVLFLGKQNVAELLA-MSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV-HGDTGYLCEVGDTTGVADQAIQLLKDE-ELHRNMGERARESVYEQF-RSEKIVSQYETIY | |||||||||||||
4 | 2gekA | 0.12 | 0.12 | 4.05 | 1.25 | Neff-PPAS | -----YSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVFGPATHRKVKKGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRPYHEK---IIGRIAVS---DLARRWQMEALGSDAVEIPNGVDVASFADA-----PLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDV--EILIVGRGDEDELREQAG-------DLAGHLRFLGQVDKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVADLDAFRRVGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVHRYDWSVAQIMRVYETVS | |||||||||||||
5 | 2gejA | 0.14 | 0.13 | 4.37 | 1.42 | PROSPECTOR2 | VCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVFGPATHRKVKEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRPYH----EKIIGRIAVSDLA--RRWQMEALGSDAVEIPNGVDVASFA-----DAPLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDV--EILIVGRGDEDELREQAGDLAGH-------LRFLGQVDDATKASRSADVYCAHLGGESFGIVLVEAMAAGTAVVSDLDAFRRAGRLVPVDDADGMAAALIGILE-DDQLRAGYVARASERVHRYDWSVAQIMRVYETVS | |||||||||||||
6 | 3c4qA | 0.11 | 0.10 | 3.73 | 1.22 | SPARKS-K | SPLQQPGTGDSGGMNVYILSTATELAKQGI-EVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAARRICEQQLVD-----------NADVLAVN--TQEEMQDLMHHYDADISVVSPGADVRATERSRRELGI------PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPTY------RHMAEEL-GV-EKRIRFLDPRELVAVYRAA-DIVAVPSFNESFGLVAMEAQASGTPVIARVGGLPITGLLVDGHSPHAWADALATLLDD-DETRIRMGEDAVEHARTFSW--AATAAQLSSLY | |||||||||||||
7 | 6d9tA | 0.12 | 0.11 | 3.97 | 1.05 | MUSTER | ITCYPS----MGGSGIIATELGIKLAERGH-EVHFITSNIPFRIRKPLEVNQYAVFQYPPYDITLSYDLDLLHMHYAVICGILAREMSGKDIKIMTTLHG----TDITVLGYDHSLQGAIKFGEKSDIVTSV---KSLAQETHEIIETEIIPIYFVRENEFPTKHNTALKSQFGIA--PDEKVLIH--NFRQVKRIDTIIETFAKVREKIP----KLILLGDGPEL--VPMRQLTKEL---VEEDVLFLGKQCVSEFYQL-SDLVLLLSEKESFGLTLLEAMKTGVVIGSNAGGIKEVGFVVDVGDCDSASDYAIRLLED-KVLYNKLQKNMLADIAER--GSELITDQYEYYY | |||||||||||||
8 | 5d00A | 0.12 | 0.10 | 3.51 | 1.52 | CNFpred | ------------GSGIIATELGKQLAEK-GHEIHFITSS-----------TYHPNIHFHEVEVN-RENLDIIHAHYALPHAVCAYLAKQ-NIGIVTTLHGTDITV-LIRFAIE-----------SSDRVTAVS-SALAAETYDLIKPKKIETIYNF-NTAAIKEKHGI---------LPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKT---KAKLLLVGD--GPEKSTACELIRKYG--LEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTPEVIKVSGFLVDVGDVTAATARAMSILEDE-QLSNRFTKAAIEMLENEF-SSKKIVSQYEQIY | |||||||||||||
9 | 6d9tA | 0.12 | 0.11 | 3.92 | 1.14 | Neff-PPAS | -------YPSMGGSGIIATELGIKLAERGHEVHFITSNIEVNQYAVFQYPPYDITLSTKIAEVIKEYDLDLLHMHYAVPHAICGILAREMSIKIMTTLHG----TDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEIITNKEIIPIYNFVRENEFPTKHNT-ALKSQFGIAPDEKVLIHVSNFRQVKRIDTIIETFAKVREKIP---SKLILLG--DGPELVPMRQLTKELNV--EEDVLFLGKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVPIGSNAGGIKEVGFVVDVGDCDSASDYAIRLLED-KVLYNKLQKNMLADIAERFG-SELITDQYEYYY | |||||||||||||
10 | 5d00A | 0.11 | 0.10 | 3.60 | 1.31 | PROSPECTOR2 | ITCYPSV----GGSGIIATELGKQLAEKGHEIHFITSSTYHPNIHFHEVEVNQYAVFKYPPYDLTRENLDIIHAHYALPHAVCAYLAKQRNIGIVTTLHGTDITVLGYDPSLKDLIRFAI---ESSDRVTAVSSALAAETYDLIKPEKKIETIYNFIKNTAAIKEK--------HGILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGKTK---AKLLLVGDGPEK--STACELIRKYG--LEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCITNIGGIPESGFLVDVGDVTAATARAMSILE-DEQLSNRFTKAAIEMLEN-EFSSKKIVSQYEQIY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |