Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | TSFDKTKLCFGKPTKFSKVAGAHIINIRYEDKVTKAKVPLSFHTPILFSFGAKTSSFQDGDDNWSMSLMCYDTNKGPSPQETAFIKALEAIECRVKKHLKDKDVKKATEMYQDPLIDMMSMFYRKMEDGVVVPDRAPALYPKLLKSKNNPGQVATGFYKFVRGKEVKIPVVKEKCRVLCDLAIDSIFLGAKPSIQIKLVDVFLVELIGERKKTLKLSKLPSAVQAEINKYSADTDEEEEEEEDN |
1 | 4jg2A | 0.09 | 0.07 | 2.48 | 1.02 | FFAS-3D | | -------------------------------SNAQNRTKVVTSVNTRLSYFWEPVSINGGAEKYSVSVLIPKTDK----------ETINAINAAVDAAIEEGIAKFGGKKPN---KAAIKLPLRDGDVERDDEAYKGHYFVNANSKTPPQ------IVDKAVRPILDRNEVYSGCYARVSLNFYAFNSNGNKGVACGLGNIQKIRDGEP-------------------LGGRTNAADDFTTIE- |
2 | 1je5B | 0.11 | 0.08 | 2.80 | 1.03 | HHsearch-2 | | -------------------------------------AKKIFTSALGTAYIAKPDY---PRGVYKVDLTIPNKD----PRCQRMVDEIVKCHEEAYAAAV----EEYEANP--PPYE--GDM--PFF-D--NGDGTTTFKFKCYQDKKT-KEINLVVVDSKGKKMEDVPIIGGGSKLKVKYSLVPYWNAVGASVKLQLESVMLVELATFGG-G-------E------DDWADEVEENGYVAS-- |
3 | 6f1ti | 0.08 | 0.07 | 2.89 | 1.05 | Neff-PPAS | | --------------HGKKGRGLEYLYLSVHDEDRDDHTRCNVWILLYHKGLLKFAVSAESLPETLVIFVADMS------RPWTVMESLQKWASVLREHIDKMKIPEKMRELERKFVKDFQDYMEPEENVLTHNLGIPVLVVCTKCDAVSVLEKEHD-----YRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHFTTVEKDAVFIPANEKKIAILHENFTTVKPEDAYEDFIV |
4 | 1je5B | 0.11 | 0.07 | 2.68 | 1.17 | HHsearch | | -------------------------------------AKKIFTSALGTAYIAKPDY---PRGVYKVDLTIPNKD----PRCQRMVDEIVKCHEEAYAAAV----EEYEANP---------PPYEGDMP-FFDNGDGTTFKFKCYQDKKT-KEINLVVVDSKGKKMEDVPIIGGGSKLKVKYSLVPYWNAVGASVKLQLESVMLVELATFG-GG---E----D------DWADEVEENGY-VAS- |
5 | 4jg2A | 0.09 | 0.07 | 2.52 | 0.81 | SPARKS-K | | ----------------------KGTENLYFQSNAQNRTKVVTSVNTRLSYFGWEVSINGGAEKYSVSVLIPKTD-------KETINAINAAVDAAIEEGIAKFG----GKKPNK--AAIKLPLRDGDVERDDEAYKGHYFVNANSKTPPQ------IVDKAVRPILDRNEVYSGCYARVSLNFYAFNSNGNKGVACGLGNIQKIRDGEPLGGRTNAADDFTTIE-------------------- |
6 | 1je5B | 0.12 | 0.08 | 2.88 | 0.86 | FFAS-3D | | -----------------------------------------FTSAL----GTAEAKPDYPRGVYKVDLTI----PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPPYEG-------DMPFFDNGDGT----TTFKFKCYASFQDKKTKETNLVVVDSKGKKMEDVPIIGGGSKLKVKYSLVP-YKAVGASVKLQLESVMLVELATFG--------------------GGEDDWADEVEENG |
7 | 1je5B | 0.12 | 0.08 | 2.91 | 0.49 | HHpred | | -------------------------------------AKKIFTSALPYAYIAKPDY---PRGVYKVDLTIPNKD----PRCQRMVDEIVKCHEEAYAAAV-----EEYEANP-PPYEGDMP--FF---D--NGDGTTTFKFKCYQDKKT-KEINLVVVDSKGKKMEDVPIIGGGSKLKVKYSLVPYWNAVGASVKLQLESVMLVELATFGGG------------E--DDWADEVEENGYVA--- |
8 | 1vw1A | 0.11 | 0.11 | 3.87 | 0.74 | MUSTER | | ADMASKDMYRDNSYQQFDTNNVRRVNNRYAEDSSVSSRKDYGWGDYYLSMVYNGDIPASSDLKIYISPKLRIIHNGYEGQKRNQCNLMNKYGKLGDKFIVYTSL--GVNPNNSSNKLMFYPVYQYSGNTSGLNQGRLLFHSKVEAWIPGAKRSLTNQNAAIGDSLNKPDDLKQYIFMTDSKGTATDVSGPVEINTISPAKVQIIVKAGGKEQTFTADKQPSPSFDEMQFNALEIDGSGLNFINN |
9 | 4jg2A | 0.11 | 0.07 | 2.39 | 0.80 | CNFpred | | -------------------------------------TKVVTSTRLSYFHGWEPVSINGGAEKYSVSVLIPKT---DKETINAINAAVDAAIEEGIAKFG----------GKKPNKAAIKLPLRDGDVERDDEAYKGHYFVNANSKT------PPQIVDKAVRPILDRNEVYSGCYARVSLNFYAFNSNGNKGVACGLGNIQKIRD-------------------------------------- |
10 | 4jg2A | 0.13 | 0.09 | 3.27 | 0.69 | HHsearch-2 | | -------------------KGTENLYFQSN-----AQNRTKVVSVNTRLYFGEPVSINGGAEKYSVSVLIPKTD----KE---TIN---AINAAVDAAIEEGI-AKFGGKKP--NK---AAIKLPLRDGDVDEAYKGHYFVNANSK-TPP-----QIVDKAVRPILDRNEVYSGCYARVSLNFYAFNSNGNKGVACGLGNIQKIRDGEPLGGR------TNA---------ADD--F--TTIE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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