Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | ARDDNVEYAFKLQANYKNSYTDIRYRQTKKADNPWKVNMTYSAEGKGTKAVYWLNVPGLFCTSERVSNTHTVKQGSGPHYYKAWKGAAQQYVSMGAENNNNTSKTYNVSGYWDEETW |
1 | 4indA2 | 0.10 | 0.09 | 3.48 | 0.83 | SPARKS-K | | ENTNFVTQSVTLSG----SQVTQSILNVQGSGSHLRLKYASVSGLTTAVTQCQLQATN-LNRSTTYSTVWDFIAG-GSSTPPSW-DIREINSIQLVANGGSSTSSVTITLILVYEQI |
2 | 3gm8A2 | 0.08 | 0.07 | 2.69 | 0.47 | FFAS-3D | | ----EAPHSVALASNKYSVKAGSDENGIPCPYASNELSFHVSGPLR------LLGVDNGNPTDMFPYQQPHCRCFRGKCVVLLQSDEEKGKGTLTVQGTKLVEKKLIIE-------- |
3 | 2l3bA | 0.13 | 0.11 | 3.84 | 0.21 | HHpred | | -IQQSYPFSIETMPVPKKLKVEIRCRDGRFEETKYFIRY-FQPDGAGTLKM---S--D----GTVLNDLYPLPGETFRLYYTSAS-TDQQTVDVYFQDSFGQLQQLTFSF------- |
4 | 3x0tA | 0.14 | 0.13 | 4.38 | 0.77 | MUSTER | | KHETDYSHDWTVEPNG--GVTEVDSKHTPIIPEVGRVDIENTGRGELTIQYQWGA-PFMAGGWKVAK-SHVVQRDE-TYHLQRPDNA--YHQRIVVIN--NGASRGFCTIYYHLEHH |
5 | 1w2tA | 0.06 | 0.04 | 1.83 | 0.72 | CNFpred | | ---------------------------------EWRMVLGSGKDEKIGRVLLYTSDD--LFHWKYEGAIFEDETTKEIDCPDLVRIG-EKDILIYSITS--TNSVLFSMGELKEGKL |
6 | 4ckgA | 0.08 | 0.06 | 2.32 | 0.40 | HHsearch-2 | | LGGEE-P-----EPSLREG-PGGLVME--------GHLFKRASNAFKTWSRRWFTIQS----NQ-------------LVYQKKYKDLRLCTVKLCPD--SERRFCFEVVSLLQADSE |
7 | 6bbtA1 | 0.11 | 0.10 | 3.74 | 0.85 | Neff-PPAS | | ILMPKTTFTFTIEPDTTASGLEIKSGETTGLTTKAIVSYDNTDKESAKNKTSNFNFETVTFSGI-GIYRYTVSEQNDGIEGIQY---DGKKWTVDVYVGNGFEPKYVVSKEVNSDVK |
8 | 6jkzA | 0.18 | 0.09 | 3.05 | 0.54 | HHsearch | | ----------------------------------------LSPE---AI-----TSAQ--VFSTQKETYTYVRC----WYRTGNSHDESATDWEWAENPDGS--YFTIDGYWWSSK- |
9 | 4mbrA1 | 0.11 | 0.11 | 3.99 | 0.68 | SP3 | | DVTDKLQ-NLDIKLSGGVQAKAGVINMDKSESMHMSLKFTIDSVNRGDTFEIKLSDNIDTNGASNYSIVEPIKSPTGEVYATGIYDSQKKSIVYSFASKNNINGILDIPLWPDDTTV |
10 | 5ftxA6 | 0.08 | 0.08 | 3.01 | 0.60 | PROSPECTOR2 | | GPVANYQIKV------LDDGKIDKSATESPANNDVQLKVYAVDANGNIVGDITITSEATDTNGVIVNASKSTANGDTVYVITDNGSKKVGKETLTVKLGTVTLGTVDVEVI--DTTL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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