Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KRGVLFEIPNGYGRFLLDILKPVEPADFNWLLADGECYLVENGELSDENLFPQDPQVMTGEAFKKRLEDARYYLIFADLKAFPKDGHPEDVSTYESYMKSSCELIVLTADSSFVTIYCKDQKNLELLYQNAKDCGFKRIEYITDHNDARTGMH |
1 | 3niwA | 0.06 | 0.06 | 2.50 | 0.72 | SPARKS-K | | QGIRLVLASGRPTYGIVPLANELRNEFGGFILSYNGGEIINWESKEYENVLPNEV----VPVLYECARTNHLSILTYDIVTENSLDPYKAIRETNDFITLPV----------AKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVP |
2 | 2k23A | 0.16 | 0.14 | 4.56 | 0.56 | FFAS-3D | | -------IPAP---PLISVQPGFWTERFRWFV---VGLAGNAVQKERQSRFTMYSTIYE------LQEDNSYNVTSIIRTFVPSSRPGQFTLGNIHSYPQIQSYDVQVADTDKVTLYGRSDELKERFVSFAKSLGLKDNNIVFSVPTDQC--- |
3 | 3gh7A | 0.14 | 0.12 | 4.24 | 0.31 | HHpred | | YRGLMLDVARHFFTRQIDLASQYKINKFHMHLSDDQGWRIEIKSW--PDLIEGPGGYYTQEQFKDIVSERYIEVIPEI--DMPGHT-NAALASYGELNPDGKRKAMRDTAVG-YSTLMRAEITISELAAISPS------PYIHLGGD------ |
4 | 2fcaA | 0.13 | 0.12 | 4.29 | 0.89 | MUSTER | | DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA--QNVKLLNIDTLTDVFEPGEVKRVYLNFSPWPKKRHEKRRLTYSHFLKKYEEVM-------SIHFKTDNRGLFEYSLKSFSEYGLLLTYVSLDNLEGNI-MT |
5 | 3niwA | 0.10 | 0.08 | 3.17 | 0.81 | CNFpred | | --RLVLASGR-PTYGIVPLANELRMNEGGFILSYGEIINWESKEMMYENVLPNEV----VPVLYECARTNHLSILTYDGEIVTENSLDPYVQKEAFLN--KMAIRETN-LPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRS--------- |
6 | 2kpoA | 0.15 | 0.09 | 3.07 | 0.61 | HHsearch-2 | | -----------------------------------------MLLY--VLIISNDKKLI--EEARKMAEKANLE----LRTV-KT---EDELKKLEEFRKESQNIK--------VLILVSNDEELDKAKELAQKMEID-VRTVTSPDEAKRWIK |
7 | 2fcaA | 0.11 | 0.11 | 3.98 | 1.47 | Neff-PPAS | | DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGG---SIHFKTDNRGLFEYSLKSFSEYGLLLTYVSLDLHNSNLEGN |
8 | 2kpoA | 0.14 | 0.04 | 1.33 | 0.83 | HHsearch | | -------------------------------------------------------------------------------------------------------------MLLYVLIISNDKKLIEEARKMAEKANLE-LRTVKTEDELKKYL- |
9 | 1e5pA | 0.15 | 0.12 | 3.95 | 0.71 | SP3 | | ------------------------FAELKWYT----IVIAADNLEKIEEGGPLRFYFRH----IDCYKNCSYVITNNQCSKTTVIGYLKGNGTYETQFEGNNIFQPLYITSDKIFFTNKTPEENEILVQFAHEKKIENILNILATDTCPE--- |
10 | 3niwA | 0.09 | 0.08 | 3.27 | 0.58 | PROSPECTOR2 | | KYKLLVLASGRPTYGIVPLANELRNEFGGFILSYNGGEIINWESKEYENVLPNEV----VPVLYECARTNHLSILTYDGEIVTENSLDPYVQKEAFLNKAIREFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYQGIDIF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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