Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MWRALRRLIAANPMGFFLWSIITKWYLIIAVASLITLYYTVLGLKKIGFIDYFGRETEDILSQSKAVAQNCIPKLKLVNGKLPLNEFWDCLSDPGEYKHEEVTGARVLEDEINKFMQKQTDSIADTAHPIIHPYEKLENQN |
1 | 5k7vA2 | 0.10 | 0.09 | 3.13 | 0.72 | SPARKS-K | | AISAIAELAKKAIEAIYRLAFMAAAIEAIALLATLAILAIALLASMAKAISAIAELAKKAIEAIYRLADNH-------TSPTYIEKAIEAIEKTEEYKEKAKSAIDEIREKAKEAIKRLEDNRT----------------- |
2 | 4l8tA2 | 0.12 | 0.11 | 3.78 | 0.78 | FFAS-3D | | --YFYTTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLCRKGMQIRCNISYLEELAKETLEPLSQAAWSDAKEIYERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLNSREDSMLDTKYQV----------- |
3 | 6n9yA2 | 0.10 | 0.08 | 2.87 | 0.33 | HHpred | | --------------------NDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCY----------GYAPRADGTIPDWNNLGSFLDTILKGPELSEDEDERAYAMFEMVRCIITL-CYAEKVHFAGFAAPACESGE-- |
4 | 5dn7A2 | 0.08 | 0.07 | 2.81 | 0.72 | MUSTER | | YMKIFLKLMKEVGPQRVLSLLLEHSRVREEVVNICICSLLTYPSEDFDLSFDLAPALVDSKRRVRQAALEAFAVLASSMGSGKTNVLFKAVDTVEL------GVMNAVQARLARKTLPTEQGFVEYAILM--PS------- |
5 | 2pftA | 0.08 | 0.06 | 2.27 | 0.59 | CNFpred | | SIKGLKEHFRK-DVETDAYIHCVSAFVKLAQSEYRLLMEIIPEHHQKKTFDSLIDALDGLMLEGENIVSAARKAIIRHDTVLTVFPILRHLK--------------QTKPEFDQVLQGT---------------------- |
6 | 1vt4I3 | 0.16 | 0.13 | 4.46 | 0.61 | HHsearch-2 | | -EYALHR------------SIVDHYNIPKTFDSLQYFYHIGHHLKNIEHPERMTLFRMVFLDFRIRHDSTAWNASGSILNTLQQLKFYKPYICD-ND--------PKYERLVNAILDFLPKI---EENLICSKYTDLMAED |
7 | 5dn7A2 | 0.08 | 0.07 | 2.78 | 0.64 | Neff-PPAS | | YMKIFLKLMKEVGPQRVLSLLLEHSRVREEVVNICICSLLTYPSEDFKLSFDLAPALVDSKRRVRQAALEAFAVLASSMGSGKTNVLFKAVDTVEL----------GVMNAVQARLARKTQGFVEYAILMPS--------- |
8 | 6b8hb | 0.11 | 0.11 | 3.82 | 0.44 | HHsearch | | PKAKANSIILGTSAAAVIYAISNELYVILLLTFLGFTGLVAKYLAYKDFADARMKKVSDVLNASRNKHVEAVDRI------DSVSQLQNVAETTVLFDVSKETVELESAHEAKAVLDSWVRYEARQQSELGNPKFQEKVL- |
9 | 2w53A2 | 0.11 | 0.10 | 3.57 | 0.57 | SP3 | | FMQELERTSTDTPVHDLRAVMIHSFIELSEDERLRKTMEIMLREMQQAGFRDALDRMERALRRARDLGQ-----LREGADPKIAARMLHATVLEPELMDLKRDGMLALDMTLAAYVKDGVFVPGTVPEPLP---------- |
10 | 5h7cA3 | 0.11 | 0.11 | 4.06 | 0.62 | PROSPECTOR2 | | IVKQLAEVAKEATDKELVIYIVKILAELLVNEIVKQLAEVAKEATDKELVIYISELVNEIVKQLEEVAKEATDKELVEHIEKILEELYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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