Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MKVNDLVTVKTDGKTRREGTILAVETFQEGIMYLVALKDYPAGIWFFNEVDSKDGTFVEPK |
1 | 3db3A1 | 0.21 | 0.18 | 5.74 | 1.00 | Neff-PPAS | | -KVNEYVDARDTNGAWFEAQVVRVTRKED-VIYHVKYDDY------PENGVVQNSRDVRAR |
2 | 1whmA | 0.13 | 0.13 | 4.52 | 1.15 | SP3 | | LEINSRVSLKVGETIE-SGTVIFCLPGSLGYFVGVDMDNPIDGVQLCSFACVESTILLHIN |
3 | 3db3A1 | 0.22 | 0.20 | 6.20 | 0.81 | SPARKS-K | | YKVNEYVDARDTNGAWFEAQVVRVTRKED-VIYHVKYDDYP------ENGVVQNSRDVRAR |
4 | 1whgA | 0.27 | 0.26 | 8.07 | 0.49 | FFAS-3D | | ISVGSRCEVRAPDHSLRRGTVMYVGLTDPGYWVGVRYDEPLGGKRYF-ECQAKYGAFVKPS |
5 | 1whgA | 0.29 | 0.28 | 8.49 | 0.56 | HHpred | | ISVGSRCEVRAPDHSLRRGTVMYVGDFKPGYWVGVRYDE-PLGKRYFECQ-AKYGAFVKPS |
6 | 1whgA | 0.31 | 0.30 | 8.93 | 0.80 | MUSTER | | ISVGSRCEVRAPDHSLRRGTVMYVGLFKPGYWVGVRYDE-PLGKRYF-ECQAKYGAFVKPS |
7 | 3ei4A | 0.22 | 0.15 | 4.66 | 0.61 | CNFpred | | -----------------IPRSILMTTFESSHYLLCALG---DGALFYFGLNIETGLLSDRK |
8 | 1whgA | 0.27 | 0.26 | 8.07 | 0.59 | HHsearch-2 | | ISVGSRCEVRAPDHSLRRGTVMYVGDFKPGYWVGVRYDEPLNGKRYFECQ-AKYGAFVKPS |
9 | 1tovA | 0.31 | 0.30 | 8.93 | 0.91 | Neff-PPAS | | -MVGNRCEVTVGAQMARRGEVAYVGAFKEGVWVGVKYDEPVAGVRYF-DCDPKYGGFVRPV |
10 | 1whgA | 0.29 | 0.28 | 8.48 | 0.84 | HHsearch | | ISVGSRCEVRAPDHSLRRGTVMYVGDFKPGYWVGVRYDE-PLGKRYFECQ-AKYGAFVKP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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