Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MSETDFSTSEEVQALANEVTCMKALVTLMLKGMGQADAGKVIINMERYIAALEDQQQAEVFSNTVKQIKHAYRQ |
1 | 5cwfA1 | 0.09 | 0.09 | 3.55 | 0.90 | SPARKS-K | | KKAVELAKKNNDDEVAREIERAAKEIVEALRENNSDEMAKVMLALAKAVLLAADEVAREIARAAAEIVEALREN |
2 | 5dl2A2 | 0.13 | 0.11 | 3.77 | 0.71 | FFAS-3D | | ---------DKASEILAKIELYERCCVSFFDGIGKEGAEQKCVQILEIFQLLNCKTIHHMFQTYLEAIKHKL-- |
3 | 5dl2A2 | 0.14 | 0.12 | 4.14 | 0.20 | HHpred | | ----DYQL---NDDCLYERCCVSFFDGIIGLINGK-EGA--EQKCVQILELLNCKTIHHMFQTYLEAIKHKLS- |
4 | 1lq7A | 0.17 | 0.15 | 4.91 | 0.85 | MUSTER | | --------GSRVKALEEKVKALEEKVKALGGGGRIEELKKKWEELKKKIEELGGGGEVKKVEEEVKKLEEEIKK |
5 | 1gqeA | 0.15 | 0.12 | 4.12 | 0.47 | CNFpred | | ---------ERAQALGKERSSLEAVVDTLDQMK---QGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQ |
6 | 5v7qY | 0.10 | 0.08 | 3.00 | 0.30 | HHsearch-2 | | GVSPGELRELTDEELAERLRESKEELF--------------NLRFQMATGQLNNNRRLRTVRQEIARIYTVLRE |
7 | 5cwfA2 | 0.09 | 0.09 | 3.55 | 0.78 | Neff-PPAS | | AKAVLLAAKNNDDEVAREIARAAAEIVEALRENNSDEMAKKMLELAKRVLDAAKNNDDETAREIARQAAEEVEA |
8 | 4cgbA | 0.12 | 0.07 | 2.38 | 0.31 | HHsearch | | DRVSAL--EQRLQLQEDELAVLKAALADALRRLRACEEQGAAL------------------------------- |
9 | 4wcxA2 | 0.11 | 0.11 | 3.86 | 0.66 | SP3 | | M---SFAKSGQIHNFCLPNAILTFKEFLIDYG-DEKTKKIGEKAIAVNLEKIPSRTVREETKRRLTRIENGERD |
10 | 1lq7A | 0.18 | 0.16 | 5.27 | 0.47 | PROSPECTOR2 | | GSR--------VKALEEKVKALEEKVKALGGGGRIEELKKKWEELKKKIEELGGGGEVKKVEEEVKKLEEEIKK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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