>PF10758 (369 residues) FPSVQINALNQLSGETKEIERHALFVGVGTTNQGKLLALTPDSDFDKVFGETDTELKKQV RAAMLNAGQNWFAHVYIAQEDGYDFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQEC YAELLAKFGRRTFFIQAVQGINHDQSDGETWDQYVQKLTTLQQTIVADHVCLVPLLFGNE TGVLAGRLANRAVTVADSPARVQTGALVSLGSANKPQDKDGNELTLAHLKSLETARYSVP MWYPDYDGYYWADGRTLDVEGGDYQVIENVRVVDKVARKVRLLAIAKIADRSFNSTTSST EYHKNYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSKTKVTIYIKVRPYDCPK EITANIFLD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FPSVQINALNQLSGETKEIERHALFVGVGTTNQGKLLALTPDSDFDKVFGETDTELKKQVRAAMLNAGQNWFAHVYIAQEDGYDFVECVKKANQTASFEYCVNTRYLGVDKASIGKLQECYAELLAKFGRRTFFIQAVQGINHDQSDGETWDQYVQKLTTLQQTIVADHVCLVPLLFGNETGVLAGRLANRAVTVADSPARVQTGALVSLGSANKPQDKDGNELTLAHLKSLETARYSVPMWYPDYDGYYWADGRTLDVEGGDYQVIENVRVVDKVARKVRLLAIAKIADRSFNSTTSSTEYHKNYFAKPLRDMSKSATINGKDFPGECMPPKDDAITIVWQSKTKVTIYIKVRPYDCPKEITANIFLD | |||||||||||||||||||
1 | 6raoD | 0.15 | 0.13 | 4.40 | 1.29 | SPARKS-K | VPGVYIEEDASPAMSVSASTAVPLFVARFTPLAGVITRIGSWLDYTILFDSVDPTASVALRLYFQNGG--GPCYLYPLEKADGPLAALPDLIDEVGEITLLASPDP---DETYRTAVYGALAASL-DQHKGYFLLADSVNGDAPSAVGGSA-----------------QVAVYYPNSLPPSALIAGVYGKTGVWK--APANVV---LNGVSDVSV-------RVTNEQQAELNPKGINVIRHFSD-RGLVVWGSRTQ-KDDDDWRYIPVRRLFDAAERDIKKALQPMVFEPN---SQLTWKRVQTAIDNYLYRLWQQGALAGNKAEYFVRVGKGITMTQDEINQGKMIIQVGMAAVRPAEFIILKFTQD | |||||||||||||
2 | 6raoE | 0.13 | 0.12 | 4.21 | 1.73 | FFAS-3D | -PGVSYNETLLTQ-ASNDDPVTMLFIGYTPPPVMQPVSVGSLTQANSLFGQRGT-LAYSLRHFFENGGLQ--CYVLPLGPGKGEPPQMLETLLADDKTGLVLVPENEVDADALWYQGWQVLLTLCRQAPQRFALL------ELPEDPASAVTLTQQSFSADQCQDESSAPVVLSP-----LPAVAAAIQRSDNGVWKAPANIALAKTRRPTQSILTSQALLD---------NQGVSCNLIRSFVG-KGVRLWGCRTLLEENTAWRYIQIRLLVSSVEHYLSKLARAYLFEP---NTAPTWMKLKGQVWTWLRQQWLAGAFFGTVEDESLSIGLDETMTEDDIRHGKMILQVRLALLAPAEFIAISLTLD | |||||||||||||
3 | 6raoD | 0.15 | 0.13 | 4.32 | 3.37 | HHpred | VPGVYIEEDASPAMSVSASATVPLFVARFTPLAGVITRIGSWLDYTILFDSVDPTASVALRLYFQNGGG--PCYLYPLEKANGPLAALPDLIDEVGEITLLA-SPDPD--ETYRTAVYGALAASL-DQHKGYFLLADSVNGDAP----S-------------AVGGSAQVAVYYPLSLPPSALIAGVYGKRGVW--KAPANV---VLNGVS---DVS----VRVTNEQQAELNPKGINVIRHFSDR-GLVVWGSRTQKD-DDDWRYIPVRRLFDAAERDIKKALQPMVFEPNS---QLTWKRVQTAIDNYLYRLWQQGALAGNAYFVRVGKGTQDE-----INQGKMIIQVGMAAVRPAEFIILKFTQD | |||||||||||||
4 | 6raoD | 0.15 | 0.14 | 4.64 | 1.26 | MUSTER | VPGVYIEEDASPAMSVSASATVPLFVARFTPLAGVITRIGSWLDYTILFDSVDPTASVALRLYFQNGGGP--CYLYPLADDNGPLAALPDLIDEVGEITLLASPD---PDETYRTAVYGALAASLDQ-HKGYFLLADSVNGDAPSAVGGS--AQVA--------VYYPNVEV--PLSLPPSALIAGVYGKTD-GVWKAPANV---VLNGVSDVSV-------RVTNEQQAELNPKGINVIRHFSD-RGLVVWGSRTQK-DDDDWRYIPVRRLFDAAERDIKKALQPMVFEPN---SQLTWKRVQTAIDNYLYRLWQQGALAGNKAE-FVRVGKGITMTQDEINQGKMIIQVGMAAVRPAEFIILKFTQD | |||||||||||||
5 | 6gkwA | 0.16 | 0.13 | 4.31 | 1.45 | CNFpred | ---------------------IIAMVLKDAK-ALGLNEIHEKEDIPVDLS---AENKEYINLALMGNVTPNKLLVYVIEG-EADIQTALDFLET-KEFNYLCMPK---AVEADKTAIKNWIIKLRDIDKVKVKAVLGKVVGN------------------------HEGIINFTTEVDEFTSRVAGLIAGTPLS--QSVTYTKLSDVVDIP-----------KMTKVDAESKVNKGELILIKEA--GAIRIARGNSLTELGEMFQKIKIVDTLDIIHSDIRKVIIDDYIGKVTNSY-DNKCLLIVAIKSYLEELEKSALIE-SDSTVEIDFE-MTLQEIKEAN-SKVFLKAKIKVLDAMEDIDLSIEI- | |||||||||||||
6 | 6raoE | 0.14 | 0.13 | 4.34 | 2.54 | HHsearch-2 | LPGVSYNETL-LTQASNDDPVMPLFIGYTPPPVMQPVSVGSLTQANSLFG-QRGTLAYSLRHFFENGGL--QCYVLPLGPGELQTPQMLETLLADDKTGLVL-VPELSLNDALWYQGWQVLLTLCRQ-APQRFALLELPEDPAS----AV-----TLTQQSFSADQCQRGAAWYSVVLSPLPAVAAAIQRSGVW--KAPANI---ALAKTR---RPT----QSIL-TSQALLDGVSCNLIRSFVGK-GVRLWGCRTLLNENTAWRYIQIRLLVSSVEHYLSKLARAYLFEPNT---APTWMKLKGQVWTWLRQQWLAGAFFGTAFSLSIGLMTEDD-----IRHGKMILQVRLALLAPAEFIAISLTLD | |||||||||||||
7 | 6raoD | 0.14 | 0.13 | 4.41 | 1.55 | Neff-PPAS | VPGVYIEEDASPAMSVSASATVPLFVARFTPLAGVITRIGSWLDYTILFDSVDPTASVALRLYFQNGGGPCYLYPLEKADDNGPLAALPDLIDEVGEITLLASP---DPDETYRTAVYGALAASLDQH-KGYFLLADSVNGDAPSAVG-----------------GSAQVAVYYPLSLPPSALIAGVYGKTDGGVWKAPANVVLNGVSDVS----------VRVTNEQQAELNPKGINVIRHFSD-RGLVVWGSRTQK-DDDDWRYIPVRRLFDAAERDIKKALQPMVFEP---NSQLTWKRVQTAIDNYLYRLWQQGALAGNKAAYFVRVGKGITMTQDEINQGKMIIQVGMAAVRPAEFIILKFTQD | |||||||||||||
8 | 6raoE | 0.14 | 0.13 | 4.34 | 3.93 | HHsearch | LPGVSYNETL-LTQASNDDPVMPLFIGYTPPPVMQPVSVGSLTQANSLFG-QRGTLAYSLRHFFENGGL--QCYVLPLGPGGAQTPQMLETLLADDKTGLVL-VPELSLNDALWYQGWQVLLTLCRQ-APQRFALLELPEDPAS----AV-----TLTQQSFSADQCQRGAAWWSVVLSPLPAVAAAIQRSGVW--KAPANI---ALAKTR---RPT----QSIL-TSQALLDGVSCNLIRSFVGK-GVRLWGCRTLLNENTAWRYIQIRLLVSSVEHYLSKLARAYLFEPNT---APTWMKLKGQVWTWLRQQWLAGAFFGTAFSLSIGLMTEDD-----IRHGKMILQVRLALLAPAEFIAISLTL- | |||||||||||||
9 | 3j9qA | 0.13 | 0.11 | 3.97 | 1.44 | PROSPECTOR2 | FHGVTVTNVDIGARTIALPASVIGLCDVFTPGPNVPVLLTSKKDAAAAFG-IGSSIYLACEAIYNRAQAV--IVAVGVETAETPEAQALLDGKSRFNAQPLLVAPGHSAQQAVATAMDGLAE------KLRAIAILDGPNSTD------------EAAVAYAKNFGSKRLFMVAPASAYAAGLFAWTDAEYGFW--SSPSNKEIKGVTGTSRPVEFLDGDETC----RANLLNNANIATII---RDDGYRLWGNRTLSS-DSKWAFVTRVRTMDLVMDAILAGHKWAVDRGITKT---YVKDVTEGLRAFMRDLKNQGAVIN--FEVYADPDLNSA---SQLAQGKVYWNIRFTDVPPAENPNFRVEVT | |||||||||||||
10 | 6raoE | 0.14 | 0.12 | 4.09 | 2.40 | SAM | -PGVSYNETL-LTQASNDDPVMPLFIGYTPPPVMQPVSVGSLTQANSLFG-QRGTLAYSLRHFFENGGL--QCYVLPLGPG--QTPQMLETLLADDKTGLVL-VPELS--LALWYQGWQVLLTLCRQ-APQRFALLELPEDPAS----AVT-----LTQQSFSADQCQRGAAWY--LPAVAAAIQRSAHDNGVW--KAPANI---ALAKTR---RPT----QSIL-TSQALLDGVSCNLIRSFVGK-GVRLWGCRTLLNENTAWRYIQIRLLVSSVEHYLSKLARAYLFEPNT---APTWMKLKGQVWTWLRQQWLAGAFFGTVFSLSIGLMTEDD-----IRHGKMILQVRLALLAPAEFIAISL--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |