Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | YQRIGGWLLAPLAYLIVTLLSASLMLALYAMAIFTPESREYLVTNSQAFTLQWYFSVVTTLLMWIYTLWVIWLFCSRSQRFPKWFILWLLLTVLLALKAFAFSPISDDIALRTLGWPLLAAAIFVPYMKRSQRVKHTFI |
1 | 3jbrE | 0.10 | 0.09 | 3.44 | 0.97 | SPARKS-K | | -------MSPTEAPKVRVTLFCILVGIVLAMTAVVSDHWAVEFTTQKEYSISAAAISVFSLGFLIMGTICALMRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMFACACAAFVLLFLGGISLLLFSLPR----- |
2 | 6e3yR2 | 0.11 | 0.10 | 3.67 | 0.99 | FFAS-3D | | ------WMLCEGIYLHTLILIPACIHAIARSLYYNDNCWISSTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTNLYMKAVRATLILVPLLGIEFVLIPWREVYDYIMHILMHFQGLLVSTIFCFFNGEVQAIL- |
3 | 6oh2A | 0.14 | 0.14 | 4.66 | 0.26 | HHpred | | -ELYFSTTAVCITEVIKLLISVGLLAKETGGRFGSPKELAKLSVPSLVYNNMAVYQVTYQ-LKIPCTALCTVLMLNRTLSKLQ-WISVFMLCGGVTLVQWKPAVVVAQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSS- |
4 | 6cc4A | 0.12 | 0.12 | 4.30 | 0.84 | MUSTER | | EDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAPYFNALAWAVTVGGVLQLVYQLPHLKKIGLVLPRIN |
5 | 3rkoC | 0.07 | 0.06 | 2.66 | 0.92 | CNFpred | | ----HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPL------FPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS--QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH |
6 | 1iijA | 0.20 | 0.05 | 1.61 | 0.45 | HHsearch-2 | | -------------------------------------------EQRASPVTFIIATVVGVLLFLILV-VVVGILIKRRR------------------------------------------------------------ |
7 | 4rfsS | 0.09 | 0.09 | 3.30 | 1.03 | Neff-PPAS | | ----LIGLTVIVAGSALGPRDGLLIGGFWGLITFVRAFTWPSSPVAPLIFTNPLISILPRLLMGLVAGSLYLWGRHRQWSMRQAMQVAAGCAALTNTVLVLGLVLMISLFTNGIPELILDVLVAPLIAMPLRRQWERLK |
8 | 2kncA | 0.14 | 0.05 | 1.72 | 0.37 | HHsearch | | ----------------------------------------GAMGSEERAIPIWLVGVLGGLLLLTILVLAMWKFFKRNRPPLEED-------------------DEEGE------------------------------ |
9 | 6mjpF1 | 0.11 | 0.09 | 3.35 | 1.00 | SP3 | | --------MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADMVGLNMPAMGLLMLPLSLYIGILLTFGRLYAESIGNKFLIRAALYLALITASVAAFNALWLAPWSQDKEAHLMEQFA----------------- |
10 | 5y50A1 | 0.10 | 0.10 | 3.72 | 0.67 | PROSPECTOR2 | | DGHLGGFSVVFGLATYTGIVSLFLVCIPLSLLWTYIGDILSLIGQDAMVAQEAGATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCWSLVFKFGLAAIAIGVSYWLNVTVLGLYMTFSSSCSKSRA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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