Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MLFKSLEFKNVDGQKVKIIEIPVLEDDNPYQFMVKVRLQTFIAQVYASKKPKKVYSFKDYLKRVLKWPVYEQIFKSEILKNNA |
1 | 4r04A | 0.09 | 0.08 | 3.23 | 0.97 | SPARKS-K | | INTITGKYYVDNNTDKSIDFSISLVSKNQNGLYLNSVYSSYLDFVKSDGHHNTSNFMNLFLDNIS----FWKLFGFENINFVI |
2 | 2jmuA2 | 0.09 | 0.08 | 3.19 | 0.48 | FFAS-3D | | ----TIDLDSADFGYA-VGEVEAMVHEKAEVPAALEKIITVSSMLGVPAQEEAPAKLMVYLQRF-RPLDYQRLLEAASSGEA- |
3 | 2ad5B | 0.19 | 0.13 | 4.27 | 0.33 | HHpred | | ----RVAGRSGDDQLVEIIEVP----NHPWFVACQFHPE------FTSTPRDGHPLFAGFVKAASEFQKRQ------------ |
4 | 3iz6P | 0.20 | 0.17 | 5.39 | 1.11 | MUSTER | | ------------GLGFKTPREAIIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEK--HSNIPAHVS |
5 | 5a22A | 0.07 | 0.06 | 2.49 | 0.52 | CNFpred | | --TNICRIRVPSLGPTFISEGWAYFK--KLDILMDRNFLLMVKDVII-------GRMQTVLSMVFSEQDIFSLLNIYRIGDKI |
6 | 3nvaA | 0.16 | 0.11 | 3.59 | 0.36 | HHsearch-2 | | ILEAGVSGISEN-GLVEIIELP----SNKFFVATQAHPE------FKSRPTNPSPIYLGFIRAVAS----------------- |
7 | 5hydA | 0.16 | 0.16 | 5.19 | 0.71 | Neff-PPAS | | RIFHRYSGKERKRFKLSKGELKLLLTEFLSCQKETQLVDKIVQDLDANKD--NEVDFNEFVVMVAALTVACNDYFVEQLKKK- |
8 | 3x0vA2 | 0.15 | 0.12 | 4.04 | 0.46 | HHsearch | | ----------YNNHFFAKG------VVDPYMVSVQQAFGYYKEKLAEDLMLVDDMTTREYLKRGGKYDFF-AINTGTNLFDQ- |
9 | 1bjfA2 | 0.10 | 0.08 | 3.14 | 0.82 | SP3 | | WAFSMYD-LDGNGY-ISKAEMSSVMKMPEDESTPEKRTEKIFRQM--DTNRDGKLSLEEFIRGAKSDPSIVRLLQC------- |
10 | 2mblA | 0.14 | 0.14 | 4.90 | 0.40 | PROSPECTOR2 | | MSGKKVEVQTCNGKTYERTYQLYAVRDEELKEKLKKVLNERMDPIKKLGCKRVRISIAEEKKEAKKFAAINKVFDLEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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