Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LLLVLLVVALCYALRWVVMRRHGGVSVALRWQPDRERSGWHLGVGRYQGEEFVWYRVWSLRVGPSRVFRRDTLEVVGRRDPVGTESYAVPADSRVLRCRPGDDEAIEIAMGPGALTGFLSWLESAPPG |
1 | 1uprA | 0.09 | 0.07 | 2.72 | 0.91 | SPARKS-K | | --------------LRRDPNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREE-SVLGSVLLPSYN---IRPDGPGAPR---GRRFTFTAEHPGMRTYVLAADTL--EDLRGWLRALGRA |
2 | 4k81A2 | 0.05 | 0.05 | 2.15 | 0.63 | FFAS-3D | | -----------QILQMFLSSSTYPEIHGFLHAKEQGKKSWKKIYFFLRRSGLYFSTKGSAAPRHLQFFSEFGNSDIYVSLAGKKKHGAPTNYGFCFKPNKAGGPRDLKMLCAEEEQSRTCWVTA---- |
3 | 2lxfA | 0.13 | 0.09 | 2.98 | 0.25 | HHpred | | ---------------------------------------HHMGTLEAQTQGPGSMQG-SM-PSSSEDVTTLCYRVTGKVQGVFADALSLV-G--YVTNNEDGSVSGVVQGPKEQVDAFVKYLHKGSPK |
4 | 3n6rA | 0.11 | 0.10 | 3.67 | 0.74 | MUSTER | | LRRVAAAAAAMHRVAEIRRTRV--------SGRMDNHERRVGTEWVVTLQG-ADFPVTIAADHDGSTVSFDDMRVTSDWTPGDQLANLMVDGAPLVLKVGKISGGFRIRTRGADLTPRQAELARLMPE |
5 | 3doaA | 0.07 | 0.05 | 2.30 | 0.63 | CNFpred | | AYDGLFTKKMVESLQFLT---TGRVHKINQPD------NDTILMVVRQNRQNHQLLLSIHPNFSRLQLTT-GGIIESIKQI--------NDRRIEIDIKSKDTIYRTVILEIMGKHSNLILVD----- |
6 | 1t95A1 | 0.18 | 0.05 | 1.53 | 0.53 | HHsearch-2 | | ------------------------------------------------------------------------------------------DKAVIARLRKG-GEEFEVLVDPYLARDLKE---GKEVN |
7 | 1x1gA | 0.11 | 0.09 | 3.40 | 0.75 | Neff-PPAS | | -----------------LSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASAEWIEAIKKLTSGPSSG |
8 | 1t95A1 | 0.20 | 0.05 | 1.75 | 0.49 | HHsearch | | ------------------------------------------------------------------------------------------DKAVIARLRKG-GEEFEVLVDPYLARDLKEGKE-VNF- |
9 | 1btnA | 0.12 | 0.09 | 3.29 | 1.00 | SP3 | | --------------------MEGFLNRKHEWEAHASSRSWHNVYCVINNQEMGFYKASGIPYHSEVPVSLKEAICEVALDYKKKKH--------VFKLRLSDGNEYLFQADDEEMNTWIQAISSA--- |
10 | 2d9yA | 0.07 | 0.05 | 2.31 | 0.60 | PROSPECTOR2 | | GSS------------GSSGNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEK-EESILGSIPLLSFRVAAVQPSDNISRKH------TFKAEHAGVRTYFFSAESPEE--QEAWIQGPSSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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