Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MSHFDDVKVQVDAALQENVIAHMNELLVALSDDDQLSREQRYQQQQRLRVAVAHHGKSEREDARAPEDERREHLTRGGKI |
1 | 2g42A | 0.09 | 0.09 | 3.29 | 0.77 | SPARKS-K | | -GNIDEIERKIDEAIEKEDYETLLSLLNKRKELEGLPLSEILEKDRKRLEIIEKRKTALFQEINVIREARSSLQK----- |
2 | 1t1mC2 | 0.06 | 0.05 | 2.24 | 0.71 | FFAS-3D | | -EQREKWVKKAKEIVEENIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLT----DEFIEKLDEVFEIKKEEIME---- |
3 | 3a6pA4 | 0.22 | 0.16 | 5.11 | 0.28 | HHpred | | LPNFDMLYNHVKQLLSELLLTQMMEALVLISNQFK----NYERQKVFLEELMAPVASIWLSQ------------------ |
4 | 2g42A | 0.12 | 0.11 | 4.00 | 0.90 | MUSTER | | -GNIDEIERKIDEAIEKEDYETLLSLLNKRKELEGLPKDKLSEILEKDRKRLEIIEKRKTALFQEINVIREARSSLQK-- |
5 | 2d4cA | 0.15 | 0.15 | 5.05 | 0.45 | CNFpred | | MRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEI |
6 | 1vt4I3 | 0.16 | 0.16 | 5.39 | 0.33 | HHsearch-2 | | DQYFYSHIGHHLKNIFRMVFLDFRFLEQKIRHDSTANTCDNDPKYERLVNAILDFLPKIELMAEAIFEEAHKQVQRGGGG |
7 | 2g42A | 0.12 | 0.11 | 3.99 | 0.89 | Neff-PPAS | | --NIDEIERKIDEAIEKEDYETLLSLLNKRKELEGLPKDKLSEILEKDRKRLEIIEKRKTALFQEINVIREARSSLQK-- |
8 | 5ubdA | 0.33 | 0.28 | 8.25 | 0.56 | HHsearch | | RTHLFEVSEAID-WIETKSIVELN--LISLATDGQLTR---AAIQQRLRAAVAVGLFKQIP-V------RFEEGLAGKT- |
9 | 2g42A | 0.16 | 0.15 | 4.99 | 0.78 | SP3 | | -GNIDEIERKIDEAIEKEDYETLLSLLNKRKELEGLPKLSEILEKDRKRLEIIEKRKTALFQEINVIREARSSLQK---- |
10 | 2g42A | 0.12 | 0.11 | 4.00 | 0.49 | PROSPECTOR2 | | -GNIDEIERKIDEAIEKEDYETLLSLLNKRKELEGLPKDKLSEILEKDRKRLEIIEKRKTALFQEINVIREARSSLQK-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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