>PF10712 (579 residues) FTFQRRFQRAQCRLDSRFVVCWQLIARFFNLLTRAVQQMVALVTRLNQLFELTVRFCVRF SIANHFLNFVLVQTRRSLDGDLLLFTAVFVFRGNVQDTVSIDIKGDFDLRHTARRRVDAI QVELTQRFVIRRAFTLTLQHMDGYRRLVVFRGREHLAVLGRDSGVFADQRRHYAAHGFDT QRQRGNVQQQNVFHITGQYAALHRCANSNSFVRVNVFTRFFTKELRHFFLHHRHTRLTTN EDNVVDIRYGQASILQRDFQRLDGTVHQVFDQAFQFRASHFDVHVLRTGGICGDVRQVHV GLLCGRKLDFRFFCRFFQTLHRQRVVTQVNALIFLKFFNQVVDHTAVEVFTTQVGITVGC QNFEGFFAVNFVNFDNRDIESTTTEVVNRDSTVADFFIQTISQRGGGRFVDDTFYFQTCD TTGIFRCLTLSIVEVSRHGDNSFSYRFAQVIFCGFLHFFQHFSRDLRRCHFLTFHIKPCV AVIGADDFVRHDGNVTLNFFVLEAAANQAFNRKQGVLRVCHCLTFSRLTNQSFTILGISN DRRRGAIALGVLQHTCSCAIHNRYTRVGSTQVDTNNFTH |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FTFQRRFQRAQCRLDSRFVVCWQLIARFFNLLTRAVQQMVALVTRLNQLFELTVRFCVRFSIANHFLNFVLVQTRRSLDGDLLLFTAVFVFRGNVQDTVSIDIKGDFDLRHTARRRVDAIQVELTQRFVIRRAFTLTLQHMDGYRRLVVFRGREHLAVLGRDSGVFADQRRHYAAHGFDTQRQRGNVQQQNVFHITGQYAALHRCANSNSFVRVNVFTRFFTKELRHFFLHHRHTRLTTNEDNVVDIRYGQASILQRDFQRLDGTVHQVFDQAFQFRASHFDVHVLRTGGICGDVRQVHVGLLCGRKLDFRFFCRFFQTLHRQRVVTQVNALIFLKFFNQVVDHTAVEVFTTQVGITVGCQNFEGFFAVNFVNFDNRDIESTTTEVVNRDSTVADFFIQTISQRGGGRFVDDTFYFQTCDTTGIFRCLTLSIVEVSRHGDNSFSYRFAQVIFCGFLHFFQHFSRDLRRCHFLTFHIKPCVAVIGADDFVRHDGNVTLNFFVLEAAANQAFNRKQGVLRVCHCLTFSRLTNQSFTILGISNDRRRGAIALGVLQHTCSCAIHNRYTRVGSTQVDTNNFTH | |||||||||||||||||||
1 | 4btgA | 0.10 | 0.09 | 3.19 | 1.17 | SPARKS-K | SASMTSEEVGKGNIDPVM-----YARLFFQYAQAGVDELVNQFTEYHQSTACIWRKLTAYITGPTAILEQLRTLAPSEHELFHHITTDFVCHVLSP--LGFILPAAYVYRVGRTATYNFYALVDCVRASDLRRMLTALSSVDS---------KMLQATFKAKGALAPALISQHLANAATFERSRGNAVVSSVLTILGRLWSPSTPKELDPSARLRGIDQLRSNLAL----------FIAYQDMVKQRGRAEVIIPSEVSPFKLRPINETTSYIIDHMGQPSHVVVYEDWQFAKEITAFSNQRFLDVEGISDRMSATLAPIGNTFAV-SAFVKNRTAVYEAVSQRG-------TVNSNGAEMTLGFPSVVERDYALDRD-----------PMVAIAALRTGIVDESLEA-------------RAS-----------------NDLKRSMFNYYAAVMHYAVAHNP-----EVVVSEHAEQGSLYLVWNVRTELRIPVGYNAIGSIRTPEPLEAKPIQPSEVLQAKVLDLANHHIWPWHEASTEFAYEDAYSVVKEFELLGLGQRRERVRILKPTVAHAII | |||||||||||||
2 | 2vz8B | 0.09 | 0.08 | 3.19 | 1.00 | MUSTER | QWESPDPKLFDTRAAEFRLSQGDVYKDLRLRGYD---QLVLESDLEGNRGRLQWSWVSFLDAMLHMSILAPGQLGLYL-FTSIRIDPVTHLYTLQDTTQAADVVVDRNLNTVVAGGA----------LFLGAHSSVAPRRPQEHLKPILEK--FCFTPHVESGCLAGNTALQEELQLCLLSGLLDAPALKACVDTALENMA----SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYT---ATDRNPQALEAAQAKLEQLH-----VTQGQWDPANPAPADLLVCNCAPAVAVGNMAATLKEG----------------GFLLLHTLLSQDQWESLFAGASLHLVALKRSFYGVLFLCRQQTPQDSPVFLSVED------------TSFRWVDSLKDILADASSRPVWLMAVGCSTSGVVGMVGGHRIRCVLVSNLSSHPSSSELQKVLQGDLVMNVYRDGAWGAFRHFPLEQDRPHAFVNVLSRGDLSSIRWVCSPLHYALPAS-CQDRLCSVYYTSLNLATGKLSPDSIPGKWLTRDCMLGMEFSGRDAGRRVMGMVPAEGLATSVLLLQHATWE | |||||||||||||
3 | 2pffB | 0.11 | 0.09 | 3.42 | 1.25 | HHsearch-2 | AYSTRPLTLSHGSLEHVLLVPTASFSQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYV---SSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTL----VKTKELIKNYITMAKRPFD-KKSNSALFRAVGEGNAQLVAFGGQGN-T-DDY----FEELRDLYQTYHVLVGDLIKFAETLSELIRTTLDAEKVFTQGLN---------ILEWLENPSNTPDKDYLLSIPISC-----PLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGIETDSWSFFVSVRKITVLFFI-GVRCYEAYPNTS-LPPS----------------------------ILEDSLENNEGVPSPMLSISNL--TQEQVQDYVNKTN-SH-LPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAPSGLDQS------RIPFSER--KL-----KFSNRFLPVASFHSHLLVPINKDLVKNNVS--FNAKDIQIPVYDTFDGSDRVERIVDCIIRLPVKWETTTQFKATH-----ILDFGPGGASGLGVLTHRNKGVRTLDINPDDDYG | |||||||||||||
4 | 5lqwQ | 0.06 | 0.06 | 2.49 | 1.43 | Neff-PPAS | -CIKDCLMDHVPVRIVTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRSHVLSSFLKAVGSMIPLMDPEYAGYYTTEAMRIIRREFDSDEMKKTILLVLQKCSAVESITPKFLREEIAPEFFQKFWVRRVALDRPLNKVVTYTTVTLAKKLGSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTADTRLIDALLIAFQEQTNSDSIIFKGFGAVTVSLDIRMKPFLAPIVSTNHLKHKTPLVRQHAADL-------------CAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEV-----LGSIINAMYCITSVMDLDPINQILPTL--TPILRNKHRKVEVNTIKFVGLIGKLPKEWMRICFELLELLKSTNKEIRRSANATFGFIAPHDVLVALLNNRVCTAVAIGIVAKVCGPYNVLPVI----MNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYIYFHRQTASNVITHLALNCSGTGHEDAFIHLMNL-LIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFPVTPDNN--- | |||||||||||||
5 | 5w6lA | 0.10 | 0.08 | 2.89 | 1.16 | PROSPECTOR2 | NA-QELKERAKVFAKPIGASYQGILDQLDLVHQAKGRDQIAASFELNKKINDYIANQALTQLKEQVTSALFIGKQVAQA------GIDAIAQTRPELAARIFVAIEEANGKHVGLTDVRWANEDPYLAPKHGYKGETPSDLGFDAKYHVD----------------LGEHYADFKQWLETSQSNGLLESTKTVHLGYSYQELQDLTGAESVQAFYFLKEAAKKA---------DPISGDSAEILLKKFADQSYLSQLDSDRDQIEGIYRSSHETDIDAWD-----RRYSGTGYDELTNKLASATGVDEQLAVLLDDRKGLLIGEVHGSDVNGLRFVNEQDALKKQGVTVIGLEHLRSDLAQPLATGVSSELSALKTKHLD--------------VTLFENARANGRIVALDANSSARPNVQGT-------------EHGLYRAGAANNIA-----VEVLQNLPDG---------------------------------EKFVAIYGKAHLQSHKGIEGFVPGITH-----------------RLDLPALKVSDSNQFTVEQDDYDDVANKP--KITFKG | |||||||||||||
6 | 5nd1B | 0.14 | 0.14 | 4.63 | 1.16 | SPARKS-K | LTITLSGSTSSTQDNSDSAKLFALAVSQVWTFRARVDSGFQHHAALTTVVTTIVGWLMRDGWLDHQTDFAVKGMLTPHIASGMDWAGVQTYSATTTDRVRADYAGRMVVHSTLRSRGDTTE---TEN---SGRYLLALPKCDAGAALALTWGKPKLGGAGGVGYITGVNGTRATPHVFGRERHMADAQEQVIRNVLAQVASLFRPAACSAHEWMNVHGALMPK-----------VSRPMNEPAFREVWSSDLQMIDRDKLNGEHFLRQLAQQITVNCTGTAMAAVLAGPTGITD------GDTTRLQKDLYHHLFVMQANTRMANVPPVNALAAWGLGSDSFTGPHCAYYFGLADAADGCFYSTTTSSDAMAQLEPGLIATAAAGVVDGGLVTEGHVYTTISAQWNGLQTEDSSHADIVGAEEVLGRRAWRPSELRDARNDLVVDRIWKIVMAMRAQL-MLISVQEDGGQHSKHYFGEAAAIGVMGHTVHGGR----EARLISNCTDTPMYKKEANDLVPPMMKVAQLSTHGGAWCNAVN--MGGNSTSIGLSILGDGTMPLQTVPWTVNEITYLSARH | |||||||||||||
7 | 5mqfM | 0.07 | 0.07 | 2.74 | 1.30 | Neff-PPAS | --QGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSKLSPESAEEYIEYLKSSEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSG-----HFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDEQALDGCPPKYAKTLYLLYAQLEEEW----------GLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIY | |||||||||||||
8 | 1w36B1 | 0.08 | 0.07 | 2.59 | 1.16 | PROSPECTOR2 | MLGLGGSAAFPRPLTVERGRIRSNIHELRIACLPLYERLLEEIDDKAQAAQWLLLAERQMGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADF-----------WRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDIRDL------VITRALAEIRETVARERRRGELGFDDMLSRLDSALRSE---------SGEVLAAAIRTRIFRRIWHHQPETRGADIFTYMKARSEVHAHYPGMV--------NSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGEPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDQAGQRGEALLMNGDDARPVRRDALTLLEIPSVYLSNRDRLESDKHLVQHK---------------SKGLWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLL------------------------------------------LGVAPLVRRRGDKKGDTDVHQSLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQT--------------GDNQPWQVNDV | |||||||||||||
9 | 5nd1A | 0.12 | 0.12 | 4.07 | 1.06 | SPARKS-K | VGLNMAKHHVRIRSSAAMDFGTH-RMMACDATMNAVSREMKAMKALAAGRSRGFAFGVLSRMVMHNSARRHGELGDASTADTYLTWELACAHGKGEVAITPVPAAWLD----PEAQLTGRERVFSEALAVDPDVGCVHVKIDGVTQRVHYASGEHYTLKGRHSKVHLTQLYHRMSTTAATAEPRADLKGFEGLGACAEFLLANSRGHHSFLPGVFGVTADVHEAAYAQNQALFLAGITFTKAQLATATYALMRRYDISERTCHFAITTIGHMVAQTAVRDLNNGSLSPLPFR---VNLSPFLVQGVQFSVHDMGIGKELLTATALGAMASLAHVCEQGGTGEEMSAIEVVATELGEALFAQKMKANLNQAYGPFVDVQLARIRSSFVRDDASALIKHAQNVTQNESGCPV---QFIALPVPSTITHYATPAIGTERWFATTRLNAAGSKVI------------SEIRWTNGLNSDVHVFAYGRST--------IVSSPLGCAEAMAAMVIAGEHKVVRIARAAVLGARNGDMMTIIRP--STSVASSAVHLRGYIPMAALVVADTRTRPGRMSTSPEAH | |||||||||||||
10 | 5o9zG | 0.08 | 0.06 | 2.25 | 0.62 | FFAS-3D | --IKKARLLLKSVRETNPPAWIASARLEEQVARNLIMKGTEMKAVVAQAVRIYIRAAELETDIRAKKRVL--RKALEHVPNSVRLWKAAVELEEPEDARIM-------LSRAVECCPTSVELWLA--LARLETYENARKVLN-----------KARENIPTDRHIWIT--------AAKLEEANGNTQM----VEKIIDRAITSLRANGVEINREQWIQDACQAVMRAVIGI-----GIEEEDRKHTWMEDADSCVA--HNALECARAIYAYALQVFPSKKSVWLRAAYFEKNH---------GTRESLEALLQRAVAHCPKAEVLWLMGAKSARSILALAFQANAVKLESENDEYERARRLLAKARSSAKLEWVQDNIRAAALRHYEDFPKLWMMKGQIEEQKEMMEAYNQGLKKCPHSTP---LWLLLSRLEEKIGQLTRARAILEKSRLGLWLESVRLEYR------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |