Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | EVYLQEKEYIDTAVIPLIPLTLEKNVKSIASMGEFVQIIVGELERQFKGRVFLLPPFTYFTSESMEEKIKRIADWTSQLTANGMKHIFYVTSDTEWKAGEASLPGTLLWLPSIPLEHMDEKYKQQIVMDQTSQLMNLLISKW |
1 | 1q3kA | 0.09 | 0.08 | 3.26 | 1.06 | SPARKS-K | | LTWKEYEARVCVLMLPVGALEQHGHMCMNV-DVLLPTAVCQRVAERIG--ALVLPGLQYGYKSQGATLTGTVQDIIRELARHGVRRLVLMNGHYENSMRYAGIHDFKVVVLSSSAKTASREKGELILEVCVQGIADAIGQEF |
2 | 1q3kA | 0.10 | 0.10 | 3.64 | 1.14 | FFAS-3D | | -TWKEYEARVCVLMLPVGALEQHGHHMCMNVDVLLPTAVCQRVAERIG--ALVLPGLQYTTSLDGATLTGTVQDIIRELARHGVRRLVLMNGHYELRELRYAGIHDFKVVVLVDLERVSREKGELILEVCVQGIADAIGQEF |
3 | 3no4A | 0.09 | 0.08 | 2.94 | 2.18 | HHpred | | STWQEVEAYSKGIIFPIGSTEQHGTGLIGTDAIC-AEAIAAGVGDAT--GAIVGPTINVG-ALHPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAHQQVCQVANW---F-CGSKLAKELYGD------------- |
4 | 2mt9A | 0.14 | 0.13 | 4.35 | 0.67 | MUSTER | | DSPKLMEQY-D-VLILGIPTWDFGEIQ------EDWEAVWDQLDDNLEGKIVAL--GLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALETNQYDLSDERIQSWCEQILNEMAEHY |
5 | 3no4A | 0.09 | 0.07 | 2.69 | 0.81 | CNFpred | | STWQEVEAYSKGIIFPIGSTEQHGTGLIGTDA-ICAEAIAAGVGDAT--GAIVGPTINVGMALRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGG---------------------------NIATLKAAFSETYAHLEDLQ |
6 | 3no4A | 0.08 | 0.08 | 3.04 | 2.65 | HHsearch-2 | | STWQEVEAYSKGIIFPIGSTEQHGTGLIGTDAIC-AEAIAAGVGDAT--GAIVGPTINVG-ALHPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAHQQVQCQVA--NWF-CGSKLAKELYGSHATPSEVALTQYV |
7 | 2mt9A | 0.11 | 0.10 | 3.60 | 0.64 | Neff-PPAS | | -SPKLMEQY-DVLILGIPTWDFGEIQEDWEAVWDQLDDL------NLEGKIVALYGLGDQLGYG-EWFLDALGMLHDKLSTKGVKFVGYWPTGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHY |
8 | 3no4A | 0.08 | 0.08 | 3.02 | 4.08 | HHsearch | | STWQEVEAYSKGIIFPIGSTEQHGTGLIGTDAIC-AEAIAAGVGDAT--GAIVGPTINVG-ALHPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAHQQVCQVANW---F-CGSKLAKELYGDHATP-SEVALTQ- |
9 | 1j2tA | 0.07 | 0.07 | 2.88 | 0.96 | PROSPECTOR2 | | KSWKEYEARDCVLMLPVGALEQHGHMCMNVDVLL-PTAVCKRVAERIGA--LVMPGLQYGYKSQQATLTGTVQDIIRELARHGARRLVLMNGHYELRELRYAGIQDFKVVVLSYWDFVKDPAVIQILEVCVQGIADAIREEF |
10 | 3no4A | 0.09 | 0.06 | 2.16 | 1.24 | SAM | | -TWQEVEAYSKGIIFPIGSTEQHGTGLIGTDAIC-AEAIAAGVGDAT--GAIVGPTINVG-ALHPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGN---------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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