Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LKCTTRHIRIYTAEVKNNELVESQNVLTLDVDPDNEFNWNEDALQKIYHQFDELVEAYTGQDLTEYNLRRIGSDLEHYMRSLLQNGEISYNLDSRVLNYSMGLPQV |
1 | 6nbqM | 0.61 | 0.61 | 17.56 | 5.48 | SPARKS-K | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV |
2 | 6nbqM | 0.61 | 0.61 | 17.56 | 2.71 | FFAS-3D | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV |
3 | 6nbqM | 0.61 | 0.61 | 17.56 | 5.41 | HHpred | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV |
4 | 6nbqM | 0.61 | 0.61 | 17.56 | 4.75 | MUSTER | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV |
5 | 3d2eA | 0.14 | 0.10 | 3.54 | 0.48 | CNFpred | | -------YTCSIMAFKK-------GQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDINPKAYNRILTAAEKLKKVLSANTNAPFSV-------------- |
6 | 6nbqM | 0.61 | 0.61 | 17.56 | 5.41 | HHsearch-2 | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV |
7 | 6nbqM | 0.61 | 0.61 | 17.56 | 5.06 | Neff-PPAS | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV |
8 | 6nbqM | 0.61 | 0.60 | 17.29 | 8.49 | HHsearch | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPR- |
9 | 6nbqM | 0.61 | 0.61 | 17.56 | 5.36 | SP3 | | LKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV |
10 | 2mraA | 0.09 | 0.08 | 3.23 | 0.51 | PROSPECTOR2 | | MA--GKELRVEIKIDCGND--DKETTYDLYFSKAEEA---KELLKKVAEKAADKIKKQGKKGLDDDARKKAKKWALEVANKIANQSTTTTDGDTFEVEVILELEHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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