Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | TLYFTDKGFEKLVTESREIEVQPEQTLVEAVLKELFKGPRQPEHETAIPSNAKLLKVSQAENIVTVDVSKEFDAGDIQEIVARIMIANTLTELPGVKYVKFYKEGQE |
1 | 6gzbA2 | 0.26 | 0.25 | 7.79 | 2.49 | SPARKS-K | | TVYYLAEDSEYYVPVTKRIDNSEKD-DITAAINELAKGPSKSGLLTDFSEDVKLVSPKIKDGRVTLDFNQSIFTKM-ISSEVLNSIVLTLTEQPDVKSVSVKVNGKS |
2 | 6gzbA2 | 0.27 | 0.26 | 8.05 | 1.69 | FFAS-3D | | TVYYLNEDSEYYVPVTKRIDNSEKD-DITAAINELAKGPSKSGLLTDFSEDVKLVSPKIKDGRVTLDFNQSIFTKMISSE-VLNSIVLTLTEQPDVKSVSVKVNGKS |
3 | 5j7rA | 0.21 | 0.21 | 6.53 | 2.48 | HHpred | | SLYFDGTKDPKIEQQEILVD--GDEILGQYLIQALIQGPSKGSLAPILPKDTKLLSFDIKDDIAIINLSKEAIVSATKEQATLEGIIATITQIPSINKINILVDNQV |
4 | 5j7rA | 0.21 | 0.21 | 6.53 | 2.08 | MUSTER | | SLYFDGTKDPKIEQQEILVDGD--EILGQYLIQALIQGPSKGSLAPILPKDTKLLSFDIKDDIAIINLSKEAIVSATKEQATLEGIIATITQIPSINKINILVDNQV |
5 | 5j7rA | 0.22 | 0.21 | 6.78 | 1.47 | CNFpred | | SLYFDGTKNPKIEQQEILVDG--DEILGQYLIQALIQGPSQKSLAPILPKDTKLLSFDIKDDIAIINLSKEAI-SATKEQATLEGIIATITQIPSINKINILVDNQM |
6 | 5j7rA | 0.21 | 0.21 | 6.53 | 2.03 | HHsearch-2 | | SLYFDGTKDPKIEQQEILVDG--DEILGQYLIQALIQGPSKGSLAPILPKDTKLLSFDIKDDIAIINLSKEAIVSATKEQATLEGIIATITQIPSINKINILVDNQV |
7 | 6gzbA1 | 0.20 | 0.20 | 6.27 | 2.67 | Neff-PPAS | | ELYLIDKNGY-VVAQTLPLP--KSESTAKQALEYLVQGGLPNGFRAVLPADTTVNVDIKKDGTAIADFSNEFKYKKEDEQKIVQSVTWTLTQFSSIDKVKLRINGHE |
8 | 5j7rA | 0.21 | 0.21 | 6.52 | 3.50 | HHsearch | | SLYFDGTKDPKIEQQEILVDG--DEILGQYLIQALIQGPSKGSLAPILPKDTKLLSFDIKDDIAIINLSKEAIVSATKEQATLEGIIATITQIPSINKINILVDNQ- |
9 | 5j7rA | 0.21 | 0.21 | 6.53 | 1.18 | PROSPECTOR2 | | SLYFDGTKDPKIEQQEILVDG--DEILGQYLIQALIQGPSKGSLAPILPKDTKLLSFDIKDDIAIINLSKEAIVSATKEQATLEGIIATITQIPSINKINILVDNQI |
10 | 5j7rA | 0.21 | 0.20 | 6.25 | 1.17 | SAM | | -LYFDGTKDPKIEQQEILVD--GDEILGQYLIQALIQGPSKGSLAPILPKDTKLLSFDIKDDIAIINLSKEAIVSATKEQATLEGIIATITQIPSINKINILVDN-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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