Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | SLIEVEAENERACIPLEKECTKTPGNCCSGLKCDCYRRFEQGVAKGIQCWCIEKDVTYK |
1 | 2mdnA | 0.31 | 0.25 | 7.68 | 2.12 | SPARKS-K | | ---------AKACTPLLHDCSHDRHSCCRGYVCDCFYP--EGEDKTEVCSCQQPKSHKI |
2 | 2mdnA | 0.32 | 0.24 | 7.15 | 0.71 | FFAS-3D | | ----------KACTPLLHDCSHDRHSCCRGFKYVCDCFYPEGEDKTEVCSCQQP----- |
3 | 2mdnA | 0.32 | 0.25 | 7.66 | 0.89 | HHpred | | ---------AKACTPLLHDCSHDRHSCCRGYVCDCFYPE--GEDKTEVCSCQQPKSHK- |
4 | 2mdnA | 0.31 | 0.25 | 7.68 | 1.74 | MUSTER | | ---------AKACTPLLHDCSHDRHSCCRGYVCDCFY--PEGEDKTEVCSCQQPKSHKI |
5 | 2mdnA | 0.27 | 0.22 | 6.76 | 1.96 | CNFpred | | ---------AKACTPLLHDCSHDRHSCCRKYVCDCFYPEG--EDKTEVCSCQQPKSHKI |
6 | 2mdnA | 0.29 | 0.24 | 7.22 | 3.07 | HHsearch-2 | | ---------AKACTPLLHDCSHDRHSCCRGYVCDC-FYPEGEDKT-EVCSCQQPKSHKI |
7 | 2mdnA | 0.28 | 0.24 | 7.25 | 2.74 | Neff-PPAS | | ---------AKACTPLLHDCSHDRHSCCRGFKYVCDCFYPEGEDKTEVCSCQQPKSHKI |
8 | 2mdnA | 0.30 | 0.24 | 7.20 | 3.60 | HHsearch | | ---------AKACTPLLHDCSHDRHSCCRGYVCDC-FYPEGEDKT-EVCSCQQPKSHK- |
9 | 2mdnA | 0.31 | 0.25 | 7.68 | 0.53 | PROSPECTOR2 | | A---------KACTPLLHDCSHDRHSCCRGYVCDCFYP--EGEDKTEVCSCQQPKSHTL |
10 | 2mdnA | 0.33 | 0.25 | 7.63 | 0.37 | SAM | | ----------KACTPLLHDCSHDRHSCCRGYVCDCFYPE--GEDKTEVCSCQQPKSH-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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