>PF10521 (303 residues) IVLALASFTSEADPWTTDESRTASTAILERFRTTSPSTPDASFWVVLETILKDKIRPLFT RTRNPAITAAGRKDMHPIPLPRFDTSILDPESKPWRSSDVYATTVFSWIVTQYQANDISR LESHFPLLVPPILALIDDETNPHKADGCTLLTHLLHPIQQAKSDILKRTNLSSVFIDAIK PCLLSLPTITPESDSIRLLGTAYPTLFLLLKTSYLPSDKQTYTAELTKVLRENLISSFHH ISTMTPSSGTQSTLSSFPHPRLSTLLLNKIHDILFDLAVHTTKYLQEIIPLIYSTLSNPF GTA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IVLALASFTSEADPWTTDESRTASTAILERFRTTSPSTPDASFWVVLETILKDKIRPLFTRTRNPAITAAGRKDMHPIPLPRFDTSILDPESKPWRSSDVYATTVFSWIVTQYQANDISRLESHFPLLVPPILALIDDETNPHKADGCTLLTHLLHPIQQAKSDILKRTNLSSVFIDAIKPCLLSLPTITPESDSIRLLGTAYPTLFLLLKTSYLPSDKQTYTAELTKVLRENLISSFHHISTMTPSSGTQSTLSSFPHPRLSTLLLNKIHDILFDLAVHTTKYLQEIIPLIYSTLSNPFGTA | |||||||||||||||||||
1 | 5vchA3 | 0.09 | 0.08 | 3.10 | 1.12 | FFAS-3D | ----------KEGEYPDASALAVIQTVREVSLNNVIEEVETSVISVFQDLLCREALSVLKGEHACQTILD-----------------ASETEATLLDV---ALDIYVALSTNL----VGGFAQVFTTAKPVILQLCQSKSKNKRSFAVGALSEIIQELLEALIISLTNDKSLEVRCNASYGLLIEYSSFDVSAIYSPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSN-VCGCVARILKHQNLVPLLSHLPFNTAFEEYDPIFKLFLKLFQEQNSTIINEAPKVIAIFATVFEKE---- | |||||||||||||
2 | 5vchA | 0.11 | 0.08 | 2.73 | 1.09 | CNFpred | -------------------PALTALRLISNASGEL-------SPSQVGVPIIEHLPTMLSS-------------------------------SNPFE-RRSILLAISVLVTG----SPDYTLSQFDKIIPATVTGLKDSEAVVQLAALKCIVQLSTNLQ----DEVA--RYHEQYLPLVIDIIDSA-------KHVVIYKYATLALDGLLEFI-----AHNDIIKYLDPLMNKLFQMLETQQ----------------SPKLRAAIVSAIGSCAFAAGSGFVPYFKTSVQYLQQFIQNVSQIE | |||||||||||||
3 | 5vchA3 | 0.08 | 0.08 | 3.10 | 1.13 | Neff-PPAS | ----------KEGEYVDASALAVIQTVREVSLNNVIEEVETSVISVFQDLSELRLFGPIIIDNGD---STHLDQLCREALSVLKGEHACQTILDASETEATLLDVALDIYVALSTNLVGGFAQVFTTAKPVILQLCQSKSKNKRSFAVGALSEIALGRDENPIISLTNDKSLEVRCNASYGVGLLIEYSSFSAIYSPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVARILKHQNLVPALLSHLPFNTAFEEYDPIFKLFLKLFQEQNSTIINEAPKVIAIFATVFEKESERI | |||||||||||||
4 | 5vchA3 | 0.09 | 0.08 | 3.18 | 1.11 | SP3 | ----------KEGEYPDASALAVIQTVREVSLNNVIEEVETSVISVFQDLSELRFGPIIIDNGDSTHLDQLCREALSVLKGEHACQTILDAS----ETEATLLDVALDIYVALSTNLVGGFAQVFTTAKPVILQLCQSKSKNKRSFAVGALSEIALGRDENPIISLTNDKSLEVRCNASYGVGLLIEYSSFSAIYSPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVARILKHQNLVPLLLSHLPFNTAFEEYDPIFKLFLKLFQEQNSTIINEAPKVIAIFATVFEKESERI | |||||||||||||
5 | 5vchA3 | 0.10 | 0.10 | 3.53 | 1.22 | PROSPECTOR2 | ----------KEGEYPDASALAVIQTVREVSLNNVIEEVETSVISVFQDLLRLFGPIIIDNGDSTHLDQLCREALSVLKGEHACQTILDASETEAT-----LLDVALDIYVALSTNLVGGFAQVFTTAKPVILQLCQSKSKNKRSFAVGALSEIALGRDENPIISLTNDKSLEVRCNASYGLLIEYSSFDVSAIYSPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVARILKHQNLVPLEHSHLPFNTAFEEYDPIFKLFLKLFQEQNSTIINEAPKVIAIFATVFEKKQFQA | |||||||||||||
6 | 5vjcA | 0.12 | 0.09 | 3.16 | 1.08 | FFAS-3D | ---------------NSAKNQRLLDEQKMKVLKWTFVTPREEFTELLRDQMMTNVNKALIA---------------------------NMFHDDFRY----HLKVIE-QLSEDLAGNSKALVCNLDLILKWLTLRFYDTNPSVLIKGLEYLVQVFQVLIDEEPHLLLKIGDPDAVRNGVRRVLRQVILVFPFVKVFGYVTECLDELTFLIESYGMNICPQSAVREIARQISD-------------------------RDNSVRNAALNCIVQVFFLSGEKTYKMIGHLNEKDLSMLDERI--- | |||||||||||||
7 | 3w3vA | 0.17 | 0.12 | 3.78 | 1.08 | CNFpred | -------------------TYDHARQALKRVAL-------KLGGEYLAAPLFQYLQQMIT-------------------------------STEWRERF-AAMMALSSAAKGC----ADVLIGEIPKILDMVIPLINDPHPRVQYGCCNVLGQISTKFS---PFIQRT--AHDRILPALISKLTS-------ECTSRVQTHAAAALVNFSEFA-----SKDILEPYLDSLLTNLLVLLQSN-----------------KLYVQEQALTTIAFIAEAAKNKFIKYYDTLMPLLLNVLK------ | |||||||||||||
8 | 2bkuB2 | 0.10 | 0.08 | 2.84 | 1.07 | PROSPECTOR2 | VMDKLGQTMSVDENQLTLEDAQSLQELLAAVIRKSPSSVEPVADMLMGLFF-----RLLEKKDS-----------------------------------AFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDA------MMNVLAQMISNPNARRE------LKPAVLSVFGDIASNI-----GADFIPYLNDIMA-------LCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHEALFPYVGTIFQFIAQVAEDPQLSL | |||||||||||||
9 | 3w3tA | 0.15 | 0.14 | 4.57 | 0.96 | SPARKS-K | CATLIGFAVGK------EKFHEHSQELISILVALQNSDDDEQSWSRICRILGDDFVPLLPIKATQDVGLIEEEEAANFQQYPDWDVVQVQGKHIAIHTSVSAMELLQSYATLLRGQFAVYVKEVMEEIA--LPSLDFYLHDGVRAAGATLIPILLSCLLAATEE------LVLLWHKASSKLIGGLMSE----PMPEITQVYHNSLVNGIKVMGDNCLSEDQLAAFTKGVSANLTDTYERMQ-------DRDEYNEFTDEDLLDEINKSIAAVLKTTNGHYLKNLENIWPMINTFLLDNEPIL | |||||||||||||
10 | 2of3A | 0.09 | 0.07 | 2.65 | 1.07 | FFAS-3D | ---------------NEDKKQRIKEEKQLKLVKWNFQAPTDEHISQLQTLLGNQAKVSLMS---------------------------QLFHKDFKQH-LAALDSLVRLADT----SPRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQE--EVSAFVPYLLLKTGEAKDNM-RTSVRDIVNVLSDMTPMLLDALKSKNARQRSELVIEYYITNSVEKTVAPF-------------VGDKDVNVRNAAINVLVACFKFEGDQMWKAAGRMADKDKSLVEERI--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |