>PF10452 (621 residues) RQFTTNSRSKSAASFKGLNKLRRVLSHDGALEIEDYAKERPDFMKKSKSSDSLSRKRAIS GLSMTALGKVRSHPGHSSASDANGGSGSNSGQHHVGLRPHRGNSVKSVLALQGGDDELYE DHSTTDEEVEYFTDEEHEGQNGGQSLRARQQPRSRSRQKQNTSSNRVYDELQRSASRSSR EDQTLRGSVKELSSSLGQGTVDTELLREDSNKTLGNNQLHYGVPSNLRDQDEDHIDNGDH INAGDHINNEDHINNEDHIGNGDHIDAGDHINNEDHIDQGNPDEDTINANSNIEIIANSL KRHGPSTRNDELIYGNDANTENATQNHSLQSTGRFSPVMILSQSTGVEKRFDRPANIAED PTSQRFNSKDQDSENKVQSNNFNYINSDFTASYASSSISERQPQNVSKPDFSTSISSLSS HLHKPAQVTADNRTTSILHQRAPQASLPTNNGNSSRLEGHSSSANRLDPLSNFNNFSQFL QSETSGAVSRTQQKLWLQRESSIMDLSANNSGADTIFLASNIEVKREFERISREYTNVRR FSNPLNASLNRVVPRSKIEVKKHRSPFSQGDELSKVFKNEFSKDAKTFKEFCRENLNQKL DIDRVLARIWNQESEDFNKES |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RQFTTNSRSKSAASFKGLNKLRRVLSHDGALEIEDYAKERPDFMKKSKSSDSLSRKRAISGLSMTALGKVRSHPGHSSASDANGGSGSNSGQHHVGLRPHRGNSVKSVLALQGGDDELYEDHSTTDEEVEYFTDEEHEGQNGGQSLRARQQPRSRSRQKQNTSSNRVYDELQRSASRSSREDQTLRGSVKELSSSLGQGTVDTELLREDSNKTLGNNQLHYGVPSNLRDQDEDHIDNGDHINAGDHINNEDHINNEDHIGNGDHIDAGDHINNEDHIDQGNPDEDTINANSNIEIIANSLKRHGPSTRNDELIYGNDANTENATQNHSLQSTGRFSPVMILSQSTGVEKRFDRPANIAEDPTSQRFNSKDQDSENKVQSNNFNYINSDFTASYASSSISERQPQNVSKPDFSTSISSLSSHLHKPAQVTADNRTTSILHQRAPQASLPTNNGNSSRLEGHSSSANRLDPLSNFNNFSQFLQSETSGAVSRTQQKLWLQRESSIMDLSANNSGADTIFLASNIEVKREFERISREYTNVRRFSNPLNASLNRVVPRSKIEVKKHRSPFSQGDELSKVFKNEFSKDAKTFKEFCRENLNQKLDIDRVLARIWNQESEDFNKES | |||||||||||||||||||
1 | 5yfpE | 0.08 | 0.08 | 2.96 | 1.62 | SPARKS-K | ----------------------SLYELDPKWKKLLKTDNFLGGLTVNEFVQELSKD---------HRNDVLIDANTKNLPTNEKDQDAIREAIWKQLDP-----KPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVETAIKKKQNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNWKLNLKSVKLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENNSAYRENNFTKLNEIAIINNFNGGV----NVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVIIETSRVFEEKATHVI----QLFIQRVFAQK--IEPRFEVLLRNSLSISNLAHGLFTLFGKFTKSLIDYFQLLEIDDSNQ--ILSTTLEQCFADLFSYLYDRSKSKFTVNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSLNDDSMLKCVVESIPNKAHLYILEILKIMFLGIVDSYMEIALEVAYWKICKVDINKTAG------VVNLNFLKFISMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTNSQIQKMEILINIILQESTKFSAILCKQPAIEIVNILNLI | |||||||||||||
2 | 6ar6A | 0.13 | 0.13 | 4.43 | 1.38 | MUSTER | GEFYWRYFA----ADALITTLKPRY-EDTNIRINLDSNTRTEYIREKLS--------SFYGSGGTALSLSQYNMGINIELSESDVWIIDVDNVVRDVTIESDKIKKGDLIEGILSTLSIEENKIILNSHEINFSGEVNGSNGFVSLTFSILEGINAIIEVDLLSKSYKLLISGELKILMLNSNHIQQKIDELQKNIPYSFVDSEGKENGFNGSTKEGLFVSELPDVVLISKVYMDDSKPSFGSNNLKDVKVITKDNVNILTGYYLKDDIKISLSTLQDEKTIKLNSVHDESGVAEILKFMNRKGNTNTSDSLMSFLESMNIKSIFVNFLQSNIKFIANFIISGTTSI-GQFEFICDENDNIQPYFIKFNTLETNYTLYVGNRQNMIVEPNYDLDDSGDISSTVINFSQKYLYGIDSCVNKVVISPNIYTDEINITPVYETNNTYPEVIVLDANYINEKINVNINDLSIRYVWSNDGNDFILMSTSEENKVSQVKI------RFVNVFKDKTLANKLSFNSDKQ--SEIILSF--YINDSLYYKPPVNNLITFNPINGGAASIGETIIDDKNNQSGVLQTGVFSTEDGFKYFAPANTLEAIDFTGKLI---DENIYYFDDNY | |||||||||||||
3 | 5mqfM | 0.06 | 0.05 | 2.42 | 3.23 | Neff-PPAS | --MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSD------RLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSG----HFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGR---PREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNG----------QLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS-DEHAREMCLRFADMECKLG--------EIDRARAIYSFCSQDPRTTGAFWQTWKDFEVRHNEDTIKEMLRIRRSVQATYNTQV | |||||||||||||
4 | 2nbiA | 0.09 | 0.07 | 2.71 | 1.76 | PROSPECTOR2 | QPSDLNPSSQPS---------------------------ECADVLEECPIDECF-------LPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMF----TPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTA--------VGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECF-LPYGDSSRPLDCTDPAVNRPDCDVLPT------------PQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPS------PDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFL--------------PFDDSSRPPDCTDP----------------SVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDGSPPVCSPTMMPSPLPSP--------------------------------TE | |||||||||||||
5 | 5yfpA | 0.08 | 0.07 | 2.91 | 1.55 | SPARKS-K | EEIKTMENIDDEVIEDDADSMIERIDLRAETEYLFNQNLLSLQKIGPNIRPYEDKVNDECHRIIPTLSLFLMEMSNFSNDIENVESQDNGLQ-------VESANKKL---LWNTLDELLKTVSLDEISLNQLLECPIREKNLPAFQAIGSDGNEVEYNLREISGLKLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDISHDQMIRILTTLLIKEISQKSYQQPVYMQLQGIDTNDEKMNELSLSQLLNEWDTFRKERKTNDINPVFKNSFSIVYQNFVEVFFHISSK---HNFEEYIKHFNDPDAPPILLDTVKVMQSDREAAVIETQLVSRIFQPIVTRLSSYFVELVKA-EPTVAPALTFYLENEIKSLESSNHEFLLSAVTRMYTQIKQVWSDNVEEQVLHFERISNAT------------TNGEILPGILDLPVGLKNSEDLFQFAKRSMDIKDTDEGY-ESIELMNSSFRKLSIAATRS---ITDYMETISLLVNSNWLTEMLSMDGIFDTNVKKVFDVEKESYASFRDTMPKLTAFVYGVSNIIENRQNLENILLATSHEIETLVKRLHTHMFGYHQENAINCDKLWSCIQGQTVSLYLKLYTVIDKHKNDIISAF | |||||||||||||
6 | 3cnfB | 0.08 | 0.08 | 3.09 | 0.68 | FFAS-3D | --FTKKDKGPTVNLFKYGAAVVNIDLNRDFFDTATGIDLTKGIPLVQDPIGVTAGAEQSAEYVSNRLVIVGETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALLRDF---TQVNWLNRDITNMLQQAGTKYGLGLTETRLDYVRLVKTIVGHALNIDHFAASVLNINLRALMEANVTADDISTQFHGPNQGALRPELAFDHDNVIRPVSEKRYFPENLEQNQSAARLVSAVKARASEADISSIHLAIAREVSPMFNVHELKKIAESFEDPSSIVVVLEFILIQNVLLLFFSRWYPVEYGIFVQRGATYTINAAGEFEFSGRNEKWDQALYLSEHF-PALFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAIAANFPRASRNPQTYIPATLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFATHVAVVLYQSGVINGPASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNSDAVRQLRALMPTLRIAQITDYGKLTLRFLGTLTRSLKMQNAQ---IRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNP-----RIARRFNGV------------ | |||||||||||||
7 | 2pffA | 0.15 | 0.12 | 4.06 | 0.42 | HHpred | ------------GSKQDVEALIEFIYDTEGWDLDAII-PFAAIPEQGIESEFAHRIRMMGCVKKQSARGIETRPAQVPMSPWTVCGAIIGWTRGTGLMS--------------------ANN-IIAEGVRTFSQKEMAFNLLGL-----LTPEVVQKSPVMADLNQFVPELKEFTRKELVETSEVRKAVSIETALE-H--KVVNNSADAAYAPRANIQLDFPPYKQVKQIAPAELE--GLLDLERVIVVISYHNGEKDVKYETSILSGIRLISDDIISQVDP--IT---LFVLVSVVEAFIASGITDPVSEVGNCSGSGVSALRGMFKDRFKDEPVQNDIL----------------QESFINTMSALISSSGPIKTPVGACATSVSDFQGSFEFGN---MKATSNTLEEFEHGRT--------P---AEMSRPATTIMQGVPAATATDKIRSVPAPGKLTTAREYASPNLNMKYRKRQLV------TREAQIKDWVENELEALKLEAEEIEDQNEFLLERTEIHNEAESQQQQWGN--DFYAPLRGALATYGLTIDLGASFHG--TSTNDKNESATINEMMKH------------------------------------- | |||||||||||||
8 | 1zvoC | 0.07 | 0.06 | 2.32 | 1.38 | MUSTER | -RLQLQESGPGLVK-PSET----SLT----IVSGGPIRRTGYYWG----------------------IRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLN---RSMSAADTAM--ARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLKATFTFVVGS---DLKDAHLT----------EVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVT-----TLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLEVSGFSPPNILLM-----LEDQREVNTSGFAPA-----------RPPPQPGSTTFWAWSVLRVPAPPSPQPATYT---VVSH---EDS----RTLLNASRSLEVSYVTDHGPM----------------------------------------------- | |||||||||||||
9 | 3nmzA | 0.10 | 0.02 | 0.77 | 0.69 | CNFpred | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIAELLQVDCGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQ---VIASVLRNLSWRADVNSKKTLR-------------------VGSVKALMECALVKKESTLKSVLSALWNLSAHCTENK | |||||||||||||
10 | 1vt4I3 | 0.12 | 0.03 | 0.96 | 0.62 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYALH----RSIVDHYNI-------P-------KTFDSDLIPPYL----------------DQYFYSHIGHHLKNIEHRMTLFRMVFLDFRF-----LEQKIRH---------DSTAWNASGSILNTLQQLK-------------FYKP------Y----------------IC------------DNDPKYERLVNAILDFLPKI-EENLI--------CSKYTDLLR--------------------------I--ALMAEDEAIFEEAH | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |