>PF10443 (432 residues) RRDLIEQIQNWLMESSDTFIVVQGPRGSGKKELVLQQTLEGRKNVLVIDCKPIVEARGEG GTIKNMATAVGYRPVFSWANSMSSLVDLAVQSTTGVKSGFSETLETQVVKILHTAASALK DVSLASRHKNDKDADLSDDAYLDAHPEKRPVVVIDNFLHKNEESSIIYEKMAQWAAMLVQ NNVAHVIFLTNDTSYSKSLSRVMPDRVYRQVALGDLSPDVAKKFVASRLEVDDTEKQKDS DSEKQQETPRSDLSELDDCIDLLGGRLTDLEFLARRIRGGQSPKHAVDDIINQSATEIVK MYLLGGKVDAEERKWSTEQAWYLIKSLVAQQSLRFNEVLLSDTFASSQTSRAASGELALE SLTNSELITVKTHYGRPQTITAGKPMYRAAFKVLAEDPVLRAKMDLAVLTEMAKVEAKTI DKVENELALLGA |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RRDLIEQIQNWLMESSDTFIVVQGPRGSGKKELVLQQTLEGRKNVLVIDCKPIVEARGEGGTIKNMATAVGYRPVFSWANSMSSLVDLAVQSTTGVKSGFSETLETQVVKILHTAASALKDVSLASRHKNDKDADLSDDAYLDAHPEKRPVVVIDNFLHKNEESSIIYEKMAQWAAMLVQNNVAHVIFLTNDTSYSKSLSRVMPDRVYRQVALGDLSPDVAKKFVASRLEVDDTEKQKDSDSEKQQETPRSDLSELDDCIDLLGGRLTDLEFLARRIRGGQSPKHAVDDIINQSATEIVKMYLLGGKVDAEERKWSTEQAWYLIKSLVAQQSLRFNEVLLSDTFASSQTSRAASGELALESLTNSELITVKTHYGRPQTITAGKPMYRAAFKVLAEDPVLRAKMDLAVLTEMAKVEAKTIDKVENELALLGA | |||||||||||||||||||
1 | 2qenA | 0.13 | 0.09 | 3.24 | 1.28 | SPARKS-K | REEESRKLEESLENYP--LTLLLGIRRVGKSSLLRAFLNER--PGILIDCRELYGHITREELIKELQSTISP---------FQKFQSKFKISLNLLTLEPRKLS-------LREVFRELNDLGEELG---------------------EFIVAFDEAQYLRRGGKELLALFAYAYDSL---PNLKIILTGSEVGLLHDFLKPLYGRIAGEVLVKPFDKDTSVEFLKRGFREVN---------------LDVPENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGELEELRRRSP--------RYVDILRAIAL-GYNRWSLIRDYLAVKGTKIPE-PRLYALLENLKKMNWIVEEDN-----TYKIADPVVATVLRI--------------------------------------- | |||||||||||||
2 | 2qenA | 0.12 | 0.09 | 3.19 | 2.12 | FFAS-3D | REEESRKLEESLEN--YPLTLLLGIRRVGKSSLLRAFLNERPGILID---------------CRELYAERGHITREELIKELQSTISPFQKFQSKFKISLNLKFLTLEPRKLREVFRELNDLGEEL---------------------GEFIVAFDEAQYLRFYGSRGGKELLALFAYAYDLPNLKIILTGSEVGLLHDFLKILYGRIAGEVLVKPFDKDTSVEFLKRGFREVNLD---------------VPENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGEL--------EELRRRSPRYVDILRAIA-LGYNRWSLI-RDYLAVKGTKIPEPRLYALLENLKKMNWI--VEEDNT---YKIADPVVATVLR---------------------------------------- | |||||||||||||
3 | 2qenA | 0.13 | 0.09 | 3.29 | 1.06 | HHpred | REEESRKLEESLEN--YPLTLLLGIRRVGKSSLL-RAFLN-ERPGILIDCRELYAEITREELIKELQSTI---------SPFQKFQSKFKI-SLNLK-FLTLEPRLSLREVF----RELNDLGEE---------------------LGEFIVAFDEAQYFYGRGKELLALFA-YA---YDSPNLKIILTGSEVGLLHDFLSPLYGRIAGEVLVKPFDKDTSVEFLKRGFREVNLDV---------------PENEIEEAVELLDGIPGWLVVFGVELRNG-DFGRAMKRTLEVAKGLIMGELRR-----------RSPRYVDILRAIALG-YNRWSLIRDYLAVKGT-KIPEPRLYALLENLKKMNWIVEED-----NTYKIADPVVATVLRI--------------------------------------- | |||||||||||||
4 | 2qenA | 0.12 | 0.09 | 3.19 | 1.18 | MUSTER | REEESRKLEESLENYP--LTLLLGIRRVGKSSLLRAFLNER--PGILIDCRELYGHITREELIKELQSTISP-----------FQKFQSKFKISLNLKFLTLEPRKL---SLREVFRELNDLGEELG---------------------EFIVAFDEAQYLRFYGSRGGKELLALFAYAYDSPNLKIILTGSEVGLLHDFLKILYGRIAGEVLVKPFDKDTSVEFLKRGFREVNLD---------------VPENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGELEELRRRS--------PRYVDILRAIALGY-NRWSLIRDY-LAVKGTKIPEPRLYALLENLKKMNWIVEEDN-----TYKIADPVVATVLRI--------------------------------------- | |||||||||||||
5 | 2qenA | 0.13 | 0.09 | 3.24 | 1.48 | CNFpred | REEESRKLEESLEN--YPLTLLLGIRRVGKSSLLRAFLNE--RPGILIDCRELYAHITREELIKELQSTIS------PFQKFQSKFKISL--------NLKFLTLEPRKLSLREVFRELNDLGEEL---------------------GEFIVAFDEAQYLRFGGKELLALFAYAYDSL---PNLKIILTGSEVGLLHDFLKILYGRIAGEVLVKPFDKDTSVEFLKRGFREVNLDV---------------PENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGELEEL-----------SPRYVDILRAIALGY-NRWSLIRDYLAV-KGTKIPEPRLYALLENLKKMNWIVEED-----NTYKIADPVVATVLRI--------------------------------------- | |||||||||||||
6 | 2qenA | 0.13 | 0.10 | 3.36 | 0.89 | HHsearch-2 | REEESRKLEESLEN--YPLTLLLGIRRVGKSSLL-RAFLN-ERPGILIDCRELYAERTREELIKELQSTISPF--QKFQSKFKI-SL----NLKF----LTLEPR---KLSLREVFRELNDLGEE---------------------LGEFIVAFDEAQYLRFYRKELLALFAYAYDS---LPNLKIILTGSEVGLLHDFESPLYGRIAGEVLVKPFDKDTSVEFLKRGFREVNLDV---------------PENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGELEE-L-----RR-RSPR-YVDILRAIALGY-NRWSLIRDY--LAVKIP--EPRLYALLENLKKMNWIVEED--N---TYKIADPVVATVLRI--------------------------------------- | |||||||||||||
7 | 2qenA | 0.12 | 0.09 | 3.12 | 1.44 | Neff-PPAS | REEESRKLEESLENY--PLTLLLGIRRVGKSSLLRAFLNER--PGILIDCRELYAERTREELIKELQSTISP----------FQKFQSKFKISLNLKFLTLEPRKLSLREVFRELNDLGEELG-------------------------EFIVAFDEAQYLRFYGSRGGKELLALFAYAYDSPNLKIILTGSEVGLLHDFLKILYGRIAGEVLVKPFDKDTSVEFLKRGFREVN---------------LDVPENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGELEELRRRS--------PRYVDILRAIALGYNR--WSLIRDYLAVKGTKIPEPRLYALLENLKKMNWIVEED-----NTYKIADPVVATVLRI--------------------------------------- | |||||||||||||
8 | 2qenA | 0.13 | 0.09 | 3.30 | 1.20 | HHsearch | REEESRKLEESLEN--YPLTLLLGIRRVGKSSLL-RAFLN-ERPGILIDCRELYAERTREELIKELQSTISP--FQKFQSKFKI-SL----NLKF----LTLEPR---KLSLREVFRELNDLGEE---------------------LGEFIVAFDEAQYLRFYRKELLALFAYAYDS---LPNLKIILTGSEVGLLHDFLSPLYGRIAGEVLVKPFDKDTSVEFLKRGFREVNLDV---------------PENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGELEE-L-----R-RRSPR-YVDILRAIALGY-NRWSLIRDY--LAVKGKIPEPRLYALLENLKKMNWIVEED--N---TYKIADPVVATVLRI--------------------------------------- | |||||||||||||
9 | 2qenA | 0.13 | 0.10 | 3.37 | 1.87 | PROSPECTOR2 | REEESRKLEESLEN--YPLTLLLGIRRVGKSSLLRAFLNE--RPGILIDCRELYAERGHEELIKELQSTISP----------FQKFQSKFKISLNLKFLTLEPRKLSLREVFRELNDLGEEL-------------------------GEFIVAFDEAQYGSRGGKELLALFAYAYD---SLPNLKIILTGSEVGLLHDFLKPLYGRIAGEVLVKPFDKDTSVEFLKRGFREVN---------------LDVPENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGEL--------EELRRRSPRYVDILRAIA-LGYNRWSLIRDY-LAVKGTKIPEPRLYALLENLKKMNWIVEE-----DNTYKIADPVVATV---------------------------------------LRI | |||||||||||||
10 | 2qenA | 0.13 | 0.09 | 3.22 | 2.12 | SAM | REEESRKLEESLEN--YPLTLLLGIRRVGKSSLL-RAFLN-ERPGILIDCRELYAERTREELIKELQSTI--SPFQKFQSKFKI-SLNLK--------FLTLEP---RKLSLREVFRELNDLGEE---------------------LGEFIVAFDEAQYLRFYRKELLALFAYAYD---SLPNLKIILTGSEVGLLHDFESPLYGRIAGEVLVKPFDKDTSVEFLKRGFREVNLDV---------------PENEIEEAVELLDGIPGWLVVFGVEYLRNGDFGRAMKRTLEVAKGLIMGELEEL----------RSPRYVDILRAIAL-GYNRWSLIRDYLAIP------EPRLYALLENLKKMNWIVEED--N---TYKIADPVVATVLR---------------------------------------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |