Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | YSNGTFSNGSYCFLAFEPYTPQLLSNGTFLNETSCYSPINPMGTRSKVGLFFACFFGLSIMFTFVNLRKHGRLFLPQEKRFHAIGRRWQWYWMLVVAGFAIISAIAGVDVDRYYVPELPIVLNNFFWILMLPTTMCVVWESVRHWGSWQERQLVDPNSFALKQDDRRSKVEFWIPLVFYFFTWMNFFMVVPRPWGAIELQRDPEQTAQKAEPAATDLRFKIGAFFLFGSWLTTIFSLWHSIKHYKSRNRGILNRIIGFIKYIPPRFIITIPLSLVMIGYEAASAFEFAISPMK |
1 | 4grvA1 | 0.10 | 0.09 | 3.45 | 1.32 | SPARKS-K | | -NSDLDVNTDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAPMLFTMGLQNRSADGTHPGGLVCTPIVVIQVNTFMSFLFPMLVISILNTVIANKLTV----MSGSVQALRLVARAVVIAFVVCWLPYHVRRLMFCY--ISDEQWTTFLFDFYHYFYMTNALAYASSAINPILYNLVSANFRQV---- |
2 | 2ziyA | 0.16 | 0.14 | 4.54 | 0.94 | FFAS-3D | | ------------------------------NETWWYNPSIIVHPHWRLGIFIGICGIIGCGIVIYLFTKTKSLQTPANLKKWIFGFAACYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWGPIFGWGAYTLEGVLCNCSFDYISRDSTTRLGFFGPILIIFFCYFNIVMSVSNHEKEMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQL----PVMFAKASAIHNPMIYKFREAI-------- |
3 | 5xszA | 0.14 | 0.12 | 4.07 | 2.28 | HHpred | | ------------------FMVGLITNVAAMYIFMCSLKLRNETTTYMMNLVVSDLLFV-LTLPLRVFYFV-------Q-QNWPFGSLLCKLSLFYTNMYGSILFLTCISVDRFLAIVYPFRSRGLRTKRNAKIVCAAVWVLVLSGSMLNSTNKLENNSICFEWVIFIETVGFLIPLMLNVVCSAMVLQTLRRPNTVNIFEMLPSSTFRTGTWDAYLNKKKILRMIICFCFIPYNV--NLVFYSLVRTNKGCAA------ESVVRTI-YPIALCIAVIVYYFTS---------- |
4 | 4ib4A | 0.11 | 0.10 | 3.71 | 0.92 | MUSTER | | --------------EEQGNKLHWAA-TIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAGIENITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKKDFRHGF--DILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLQTISNEQ |
5 | 3rkoB | 0.08 | 0.05 | 2.13 | 1.29 | CNFpred | | --------------------------------------------TPVSALIHAATMVTAGVYLIARTHGLFLM--------TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTH--------------------------AFFKALLFLASGSVILACHHEQNIFKMGGLR---------------KSIPLVYLCFLVGGAALSALPTAGFFSK-------DEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKE |
6 | 3emlA | 0.13 | 0.11 | 3.69 | 1.06 | HHsearch-2 | | -------------IMGSSAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT-IS-------TGF--CAACHGCLFIFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGGWNNCGQSGEGQACLFEPNFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEETPNDAYRSTLQKEVHAAKSLAALCWLPLHIIN--CFTFFCPDC-----------SHAPLWLMY----LAIVLSHT--------NSVVN |
7 | 4grvA1 | 0.09 | 0.09 | 3.28 | 1.26 | Neff-PPAS | | NSDLDVNTDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARK-SLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFDGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMSG--SVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQV----- |
8 | 3emlA | 0.13 | 0.12 | 4.12 | 1.64 | HHsearch | | ----IM--GSSVYITVAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT-IS-------TG--FCAACHGCLFIFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGGWNNCGQSGEGQACLFEPNFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEEAPNDAYRSTLQKEVHAAKSLAALCWLPLHI--INCFTFFCPDC-----------SHAPLWLMYL-AIVLSPFIYAYRIR-EFRQTFR- |
9 | 6drxA | 0.12 | 0.12 | 4.12 | 1.27 | PROSPECTOR2 | | VEEQGNKLHWAALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLV-----LCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIETNPNNITCVLFGSLAAFFTPLAIMIVTYFLTIHALQKKAADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLQTISFITNITLVLCDSCNQYR |
10 | 3emlA | 0.12 | 0.08 | 2.79 | 1.44 | SAM | | --------------------------AILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST---GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGGWNNCGQSGEGQVPMNYMYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEM----------AYRSTLQKEVHAAKSLAILCWLPLHI---------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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