>PF10359 (513 residues) GLKVRFDSFMLDLHQRREEFNTRDHGRKTQSRTSGIKIHAAQLDLANADVRAVSASIRGT TTEAIKKGTLANLSIDQVETADVSRFTIPDNDLTWIDMDDFVELDWILPTEPNPDTKILP LAFAPRLTYFRQTDIGGSIAGDPDRTSPFGDEPTHFCIMTRDDDPRRVQAHLIQERLDQL EVQIENHGRTLGEAELKMVRDDSNNPIFAADFEALRRHSSVLRDKKAFLENMAQQLTSKS PTHGKMPKFKGDAASEASIEVDRESMKIPSGAEFESDAQNRFVIHNLHFKWNNLLRNIVL RYTHQVSQRRGFIYYLSRPAVKFIIDIVEEQYKAKFGTKTANGKAATDDNSTDPSFMDRE TQEDIEERIKRILQDGRKFVNADQTDATDTSTNVAMEDLTGGISEDFRAQSNYHVRVIAP QIQLQSDKNKKNVVLLTAKGMELRVVEIMDKERLSDAVSGLVQRRILVSMDSTQFFVTHQ KWFSTHLVSMYAGSQYGTPVSTSWPPWVPMEVM |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | GLKVRFDSFMLDLHQRREEFNTRDHGRKTQSRTSGIKIHAAQLDLANADVRAVSASIRGTTTEAIKKGTLANLSIDQVETADVSRFTIPDNDLTWIDMDDFVELDWILPTEPNPDTKILPLAFAPRLTYFRQTDIGGSIAGDPDRTSPFGDEPTHFCIMTRDDDPRRVQAHLIQERLDQLEVQIENHGRTLGEAELKMVRDDSNNPIFAADFEALRRHSSVLRDKKAFLENMAQQLTSKSPTHGKMPKFKGDAASEASIEVDRESMKIPSGAEFESDAQNRFVIHNLHFKWNNLLRNIVLRYTHQVSQRRGFIYYLSRPAVKFIIDIVEEQYKAKFGTKTANGKAATDDNSTDPSFMDRETQEDIEERIKRILQDGRKFVNADQTDATDTSTNVAMEDLTGGISEDFRAQSNYHVRVIAPQIQLQSDKNKKNVVLLTAKGMELRVVEIMDKERLSDAVSGLVQRRILVSMDSTQFFVTHQKWFSTHLVSMYAGSQYGTPVSTSWPPWVPMEVM | |||||||||||||||||||
1 | 5xn7A | 0.09 | 0.08 | 3.19 | 1.31 | Neff-PPAS | GFEVRSTILLDNPQQKSIERFILANFDNFEQ---PDELFLVDNKVLSHHDGRTRILARKANVELSVTELLDAAHVSGKVRGESYQQVISTAEHADYELTSVEKLLNLRPDSGRVQANALLNQVNSRLEAVSVLVVSEQSIKAHESKHLYLDGNGDFVTKGK---GNLANIDKLGGSDAVLEKVKAAVSHEYGQVVADTIFAGLSANDLAKDGKGI---------DIAGLNKVHQAIEQHSPVSATYIWKPSDHSALGHAALQIGQGRTQLEGQAAADFNKQNYVSWWPLGSKSSNIRNIFNLKLRWSDFSQPAHQGLNDGETKLKRFVEKLNASEGYASVLLGNPD--------LASTGIPAHVFQPFVDQWNDTSYDDVANRFAEELQKQAQASGDPALVEKRIDNVVRLFAERALEEIEAFKASQADEGRVFRINLEGLDVAAQAEWNRLSNDPDARYQLLTKN--------ASSTVAKVLKAGGADKLIGHTWRPKFGV----WTPTELF | |||||||||||||
2 | 4xhjA | 0.07 | 0.07 | 2.93 | 1.13 | PROSPECTOR2 | ALLREYSDRNMSLKLEAFYVIVKVNPTTHEGDVGKYLLSPYRFGFLSHPVTPDVSFFDSSFAPYLTLVWHLERAETAATAERPFGVSLLPARPTVPKNTILEHKAHFATWDTNSTLRIHVPLGLPIELIVVPHTVKLNAVTSDTTWFQLDPGPSYRVYLLGRGLDMNFSKHATVDICAYPEEYRYHLSMAHTEALRMTTKADQHDINEESYYHIAARILDEIVDVQYQLKFLNYILMRIGAGAHPNTISIFADPSQLHDELSLLFGQFISYDEARDQLKTAYALSRGQ--DHVNALSLARRVIMSATERQALFFASVLDGRTTLLAHATQAALNIQEGLAYLNPSKHMFTTEEIHVMNLLSAIPTRPGLNEVLHTQLDESEIFDWTAKDLHILHTHVPEVFTCQDAAARNGEYVLILPAVQGHVITRNKPQRGLVYSLADVDVYSVVYLSKDT-CVSEHGVIETVALPHPDNLKIIIDSKDTER----QLAAMGNSTIPPFNPDMHGDDSKAV | |||||||||||||
3 | 5wtjA1 | 0.12 | 0.11 | 3.75 | 0.93 | SPARKS-K | NELNKI--FSIDFFDREKNYVLDKKILNS-------KIKIIDLDF-----------IDNKNRNRILHAISKERDLQGTQDDYIQNLKISDEEVSKALNLDVVFINDIKISEENNN----DIKYLPS---FSKVLPEILNLRNNPKNEPFDTIET-----------EKIVLNALIYVNKELYKKLILEDDLLQELKKTLGNIDEIDENIENYYKNAQISASKKKYQKKVIECYIGYLRKNYEEDFSDFKNIQEIKKQIKDINDNKTYERITTSDKTIVINDDFYIISIFALLNNAVINKIRNRFFATSVWLNTSEY--QNIIDILDEILNTLRNECITENWNLNLEKEIEKDFDDFKIQTKKNNYYEDIKNNILLEKIKFE-IDKKSNILQDEQRKLSNINKKKVDQYDKDQEILCRII-----FNSDEDE--------------------SENEN-----KFQEIYYPKERKNELYIYKKNLFLNIGNPNF-DKIYGIKADAKFLFNIDGKNI | |||||||||||||
4 | 5n77A2 | 0.12 | 0.03 | 1.04 | 0.94 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------------V----DGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGHQGDDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARL-------------------------------------------------PGGQLEQAREILRDIESLLPHNESLFQK-VNFLMQAAMGFINIEQNR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 2k48A | 0.19 | 0.04 | 1.26 | 0.34 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------HHHHHHGKPIPNPLLGLDSTENLYFQGI-DPFMSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDP--DDVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5w6lA | 0.12 | 0.10 | 3.64 | 0.77 | MUSTER | GRDQIAASFE--LNKKINDYIAEHPTSGRNQALTQLKEQVTSALFIGK-------QVAQAGIDAIAQTRPELAARIFVAIEEANGKHVGLTDVRWANEDPYLAPKHGYKGETPSDLAKYHVDLGEHYADFKQWLETSQSNGLLSKAT---DESTKTVHLGYS-----------YQELQDLTGASVQAFYFLKEAAKKADPISGDSAEILLKKFADQSYLSQLDSDRDQIEGIYRSSHETDIDAWDRRYSGTGYDELTNKLASATGVD-EQLAVLLDDRKGLLIGEV-----DVNGLRFVNEQDALKKQ----VIGLEHLRSDLAQPLIDRYLATGVSSELSALKTKHLD----------------VTLFENARANG-RIVALDANSSARPNVQGTEHGLYR-----AGAANNIAVEVL------QNLPDGEKFVAIYGKA---HLQSHKGIEGFVPGITHRL----ALKVSDSNQFTVEQDDVSLRVVY--------DDVANKPKITFKG--- | |||||||||||||
7 | 5xeiA | 0.14 | 0.07 | 2.53 | 0.55 | CNFpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------EELKQAEENLARVDLLIKEVKKQLDKLEKERNDA---LRYLDLKERLERARVALLLGEIKRLESMIDEGERKRAEIEENTIKVKSAQLRIQLEEKRRELKH--DAALIRSV----------KEVSLDLEVLRKEIEDMEAEIKALE-PVNMKAIEDFEVVERRYLEL--KSKREKLEAEKESIIEFINEIEKEKKNVFMRTLEAIAKN--------------------FSELFAKLSPGGSA----RLILENGGLEIEAKP-EKALTALAFKPAPFYLFDEID-AHLDDANVKRVADLIKESSRESQFIVITLRDVM----------------------------- | |||||||||||||
8 | 2k48A | 0.19 | 0.04 | 1.26 | 0.55 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------MHHHHHHGKPIPNPLLGLDSTENLYFQGI-DPFMSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDP--DDVNKSTLQNRRAAVSTLETKLGELKRQLADLVAAQKL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5mqfM | 0.08 | 0.07 | 2.79 | 1.23 | Neff-PPAS | KSNYQLWHELCDLISQNPDKVQSLNVTRFTDQLGKLWCSLADYYIRSGHFEKARDVYETVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDN--GQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVSLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHK-YFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDIKRAAEIYGVTHTRGIYQKAIEV-----------------------------------------------LSDEHAREMCLRFADMECKLG----EIDRARAIYSFCSQICDP-RTTGAFWQTWKDFEVR | |||||||||||||
10 | 6f1tX2 | 0.06 | 0.02 | 0.75 | 0.82 | HHsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQ------LQ-------------GGGG---------GGGGGGGGGG-----GGGGGGGGGG--GGGGGGGGGGGGGGGGGGGG------------------GG----GG----G-GG---GGGGGGGGG-----GGG--------------G------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |