>PF10350 (252 residues) LVSETFETCMSVSSAVGGVVSSSSPEGHLPMDMTLQLTDHGNSGNVTLDDGRQVTAQMVL LCAWRSVKEVSLLLGGMCGRLSVRGEGGQAGTLSEGQLLRAGEHFTRLLADTKHRGAFEQ AYVGFTMLLDRLWRCRSLPLHVLPRAWLRELLRAVADDAHSLCATRRSAGLPFMIQALVS TEVQVQGNPLCFHECMSCLVSLCACGSARARGHALHVLRALVRHAALAQRVAPYVAPALL AALQAFDANTWA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LVSETFETCMSVSSAVGGVVSSSSPEGHLPMDMTLQLTDHGNSGNVTLDDGRQVTAQMVLLCAWRSVKEVSLLLGGMCGRLSVRGEGGQAGTLSEGQLLRAGEHFTRLLADTKHRGAFEQAYVGFTMLLDRLWRCRSLPLHVLPRAWLRELLRAVADDAHSLCATRRSAGLPFMIQALVSTEVQVQGNPLCFHECMSCLVSLCACGSARARGHALHVLRALVRHAALAQRVAPYVAPALLAALQAFDANTWA | |||||||||||||||||||
1 | 3m1iC2 | 0.06 | 0.06 | 2.44 | 0.90 | SPARKS-K | TVKIIANIIKTNVAVCTSMGADFYPQLNMLQLYRAVSSMISAQVAAEGLIATKTP---KVRGLRTIKKEILKLVETYISKA------RNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKDFTEY-----RVEFYKLLKVINEKSFALELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERNEFHKNYFFIFVSETFFVLTDSDHK | |||||||||||||
2 | 1wa5C1 | 0.08 | 0.06 | 2.54 | 0.99 | FFAS-3D | -LETVAKFLAETAKTSERNLRQTQDG----------------------------FGLTLLHVIALSTRLGALFFKNFIKRK--WVDENGNHLLPANNVELIKKEIVPLMISLPNN-LQVQIGEAISSIADSLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTA----------PFLNLLKTVDEQITANEKASLNILFDVLLVLIKCQDIPEFFEDNIQVGMGIFHKYLSYSN-- | |||||||||||||
3 | 4xriA2 | 0.11 | 0.10 | 3.46 | 0.42 | HHpred | ---PLTPHFNQSVTNLLTVTAPMNGDSTAANDSLSAVASLTQEETLPLQQQVVSVED--KLILEDMQTSLCTVLQATVQRLDK-------EI--APQGDRIMQVLLQILSTGGKSSVPEGVFAAISALANAMEEE----FAKYMEAFAPFLYNALGNQE-EPSLCSMAIGLVSDVTRSLG---ER--SQPYCDNFMNYLLGNLRSTTNQFKPAILQCFGDIA--SAIGGHFETYLTIVAQVLQQAATITAG- | |||||||||||||
4 | 5jo8A | 0.11 | 0.10 | 3.57 | 0.79 | MUSTER | ALREASPAIEVFGEALVSGAYSKSWS----LAVYKKLMEMSVSTPKEDLRNMRAAIFLVRRAISSVFQASLKLLKMIITQYVPKHK------LGKLETSHCVEKTLPGLLSRSSSRLRIVAAKFIQEMALW---SEVKPLQ----IVPVHLVQLLKPNSPTH---LAMSRVELVECLLKEMGTENSGFT--ISNVMKFATGALEHRVYEVRDVALRIIFGMYRKHDDASIRKTVLYKTLFDGFTKI------ | |||||||||||||
5 | 3gb8A | 0.11 | 0.09 | 3.32 | 1.00 | CNFpred | IYLDMLNVYKCLSENISAAIQ---ANGEMVT------------------------KQPLIRSMRTVKRETLKLISGWVSRSNDP------QMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEH--RTNFFLLLQAVNSHCFPA--PPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAAQSFYQTYFCDILQHIFSVVTDTSHT | |||||||||||||
6 | 1vt4I | 0.10 | 0.10 | 3.50 | 0.68 | HHsearch-2 | SPETVLEMLQKLLY---QIDPNTSRSDHSS-NIKLRIHSIQAEKSKPYENCLLVLLNVQNAKAWNAFNQVTDFLSAATTTHIS--LDHHSMTLTPDEVKSL---LLK-YLDCRPQDLPRENPRRLSIIAESIRDGL-----ATWDNWKHSSLNVLEPAEDRLSVFPPSAHIPTILLSLIWFDVIKSDEYALHRSIVDYNIPKTFDSLDQIGHHLKNIEH----PERMTLFRMVFLDFRFLEQKIRHDSTAWN | |||||||||||||
7 | 5cwqA | 0.07 | 0.06 | 2.58 | 0.82 | Neff-PPAS | ----------------------------LERESEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACERG-----NSEEAERASEKAQRVLEEARKVSEEARLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKEQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGLEHHH-- | |||||||||||||
8 | 4xriA2 | 0.09 | 0.08 | 2.92 | 0.73 | HHsearch | AQNPLTPHFNQSVTNLLTVTAPMNGDS----TVRTAAEVLSVQNAAND---SLSAVASLSKLILDMQTSLCTVLQATVQRLDK-------E-IA-PQGDRIMQVLLQILSTGGKSSVPEGVFAAISALANAMEEE----FAKYMEAFAPFLYNALGNQE--EPSLC-SMAI-GLVSDVTRSLGER--SQPYCDNFMNYLLGNLRSTTNQFKPAILQCFGDIASA--IGGHFETYLTIVAQVLQQAATITAG- | |||||||||||||
9 | 5ugwA | 0.14 | 0.07 | 2.31 | 0.70 | SP3 | IYKILLLQAYRFHACVLQL---------------------------PFHQQVWKNPTFFLRVISDTASLCYSILKAKNAGM-SLGAKGAAGPLPSEAVQWLCHQAFLLKLT-RHRVTYVPLLGSLRTAQTQLSRKLPGT--------TLTALEAAANPA--------------------------------------------------------------------------------------------- | |||||||||||||
10 | 2bkuB2 | 0.10 | 0.10 | 3.52 | 0.91 | PROSPECTOR2 | TDTTSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNAAVIRKSPSSVEPVADMLMGLFFRLLEDVFYAISALAASLGKGF---------EKYLETFSPYLLKAL-NQVDSPVSITAVGFIADISNS----LEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSLNDIMALCVAAQNTKPENGTVLEAVLDAYVGIVAGLHDKPEATIFQFIAQVAEDPQLYDATSRAAVGLIGDIAAMFPDGSIL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |